Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq331 199 6e-49 seq5 140 5e-31 seq85 95.1 2e-17 seq230 84.2 3e-14 seq101 77.0 5e-12 >seq331 Length=417405 Score = 199 bits (220), Expect = 6e-49 Identities = 201/258 (78%), Gaps = 15/258 (6%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || ||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 314718 GTCAGTGTAGTGCCCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 314660 Query 75 CAAACTTCCATTG-----GCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA--CCAAC 127 ||| || | |||| | |||| | |||||||||||||| | ||||| Sbjct 314659 CAATCTGGGGGGGTGGGGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGAGCCAAC 314600 Query 128 CATAGTCGA-TGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 || || | ||| |||||| | | |||| ||||| |||||||||||| Sbjct 314599 CACTTGGGAGTACAACTAGTTAGCATGCCAGAGTCTTGTTCG------GAATTAACCAGA 314546 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 314545 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCAAGAAAGAGC 314486 Query 247 TATCAATCTGTCCTCCCT 264 |||||||||||| | ||| Sbjct 314485 TATCAATCTGTCATTCCT 314468 >seq5 Length=47208961 Score = 140 bits (154), Expect = 5e-31 Identities = 101/117 (86%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| ||| |||||||||||||| ||||||||| |||||||| Sbjct 28849144 CTAATTAGCATGCCAGAGTCTTGTTAGTTATCGGAATTAAGCAGACAAATGGCTCCACCA 28849203 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||| ||||||||||||||||||| |||| ||||||||||||||||||||| Sbjct 28849204 ACTAAGAATGGCCATGCACCACCACCCACGGAATGGAGAAAGAGCTATCAATCTGTC 28849260 >seq85 Length=8781256 Score = 95.1 bits (104), Expect = 2e-17 Identities = 75/90 (83%), Gaps = 4/90 (4%) Strand=Plus/Minus Query 165 TTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC 224 |||||| || |||||||||||| |||| || ||| ||||||| ||||||| ||||| Sbjct 3750402 TTCGTTGTCAGAATTAACCAGATAAATTGCTACAC----TAAGAACAGCCATGCTCCACC 3750347 Query 225 ACCCATAGAATCAAGAAAGAGCTATCAATC 254 | ||| ||||||||||||||||| |||||| Sbjct 3750346 ATCCACAGAATCAAGAAAGAGCTTTCAATC 3750317 >seq230 Length=2054077 Score = 84.2 bits (92), Expect = 3e-14 Identities = 65/77 (84%), Gaps = 4/77 (5%) Strand=Plus/Minus Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||| ||||| ||| ||||||||| || |||||||||||| |||||| ||||| || Sbjct 2023840 CCAGAGAAATCGCTCTACCAACTAAAAATGGCCATGCACCAGCACCCACAGAAT----AA 2023785 Query 242 AGAGCTATCAATCTGTC 258 |||||||||||||| || Sbjct 2023784 AGAGCTATCAATCTATC 2023768 >seq101 Length=7775880 Score = 77.0 bits (84), Expect = 5e-12 Identities = 70/88 (80%), Gaps = 4/88 (5%) Strand=Plus/Minus Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223 ||| |||||| |||||||||| ||| |||| || |||||| | |||| ||||| Sbjct 3135596 GTTTGTTATCAGAATTAACCA----AATTGCTCCCTCAGCTAAGATCAGCCACATACCAC 3135541 Query 224 CACCCATAGAATCAAGAAAGAGCTATCA 251 |||||| |||||||||||||||||||| Sbjct 3135540 CACCCAAGGAATCAAGAAAGAGCTATCA 3135513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796739845833