Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq331 77.0 2e-12 seq18 77.0 2e-12 >seq331 Length=417405 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| || |||||| | ||||||||||||||||||| Sbjct 314916 CTCACTAAACCATG-CAATCGGTAGTA-GCAACGGGCAGTGTGTACAAAGGGCAGGGACT 314859 Query 109 TAATACAACGCAAGCT 124 |||| ||||| ||||| Sbjct 314858 TAAT-CAACGGAAGCT 314844 >seq18 Length=28711273 Score = 77.0 bits (84), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 ||||| || |||| ||| ||||||| ||||||||| |||| |||||||||||||||| Sbjct 22952559 CTCACCAAACCATCCAATT-GGTAGTA-GCGACGGGCAGGGTCTACAAAGGGCAGGGACT 22952502 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 22952501 TAAT-CAACGCAAGCT 22952487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300778023740