Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq331 159 7e-37 seq18 96.9 7e-18 seq230 89.7 1e-15 seq279 77.0 6e-12 >seq331 Length=417405 Score = 159 bits (176), Expect = 7e-37 Identities = 170/223 (76%), Gaps = 1/223 (0%) Strand=Plus/Plus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| ||||| || |||| Sbjct 314654 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGGGCACTAC 314712 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || | | ||| | || ||| |||||| || | | | Sbjct 314713 ACTGACTGGCTCAGTGTGTGCCTACCCTACCCAGGCAGGCGCGGGTAACCTGTTGAGCCC 314772 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | || || ||||||| | | |||||||||||| | | | |||||||||| || |||||| Sbjct 314773 CATTCATGATGGGGATTGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAG 314832 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 ||| ||||| ||| ||||||||| |||||||||||||||| Sbjct 314833 TGCGGGTCATAAGCTTCCGTTGATTAAGTCCCTGCCCTTTGTA 314875 >seq18 Length=28711273 Score = 96.9 bits (106), Expect = 7e-18 Identities = 157/224 (70%), Gaps = 29/224 (13%) Strand=Plus/Plus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 ||| ||||| |||||||||| ||||||||||||||||||| ||||| ||| Sbjct 22952324 AAGATTGAG-CAATAACAGGCCTGTGATGCCCTTAGATGT-CTGGG----------GCTT 22952371 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 || |||| | | ||| || || || | |||| ||| | | || | Sbjct 22952372 CAATGACTG---------GCTCAGCAT----GCAGGCA---CTGG-TAACCCGTTGAACC 22952414 Query 225 TCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAA 284 | || || ||||||| | |||||||||||| | | | |||||||||| || ||||| Sbjct 22952415 CCATTCATGATGGGGATCAGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAA 22952474 Query 285 GCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | || ||||| ||| |||||||||| |||||||||||||||| Sbjct 22952475 GTGCAGGTCATAAGCTTGCGTTGATTAAGTCCCTGCCCTTTGTA 22952518 >seq230 Length=2054077 Score = 89.7 bits (98), Expect = 1e-15 Identities = 158/226 (70%), Gaps = 12/226 (5%) Strand=Plus/Plus Query 104 GAAGTTTGAGGCAATAACAGGTCT-GTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGC 162 |||| ||||| | |||| || || |||||||||||||||| |||| ||| || || Sbjct 2023918 GAAGATTGAG--AGTAACTGGCCTTGTGATGCCCTTAGATGCCTGGGGCTGCATACGTGC 2023975 Query 163 TACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAA 222 ||| ||||| | || | | | | ||| || || |||| ||||||| || | || Sbjct 2023976 TACGCTGACTGGCTCAGTGTTTGCCTACCCTATGCTGGCAGGTGTGGGTAACCTGTTGAA 2024035 Query 223 ACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGT 282 || || || ||||||| ||| |||||||||||| | | | ||||||||| || ||| Sbjct 2024036 TGTCATTCATGATGGGGATGGAG-ATTGCAATTATTCCCCATGCACGAGGAATTCCCAGT 2024094 Query 283 AAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 || ||| || | | || || || ||||||||||||||| Sbjct 2024095 AA----GTGGAATAATCTTGCCTTAAT----TCCCTGCCCTTTGTA 2024132 >seq279 Length=1109584 Score = 77.0 bits (84), Expect = 6e-12 Identities = 122/171 (71%), Gaps = 3/171 (2%) Strand=Plus/Minus Query 105 AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTA 164 ||| ||||| ||||||||||||||||||||||||||| || | |||| ||| | |||| Sbjct 289310 AAGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGAGGTCCGGGGCTACACATGTGCTA 289252 Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 || |||| | || | || | | ||| | || ||| |||||| | | || | Sbjct 289251 CATTGACTGGCTCAGTGTGTGCCTACCCTACACAGGTAGGCACGGGTAACCCATTGAACC 289192 Query 225 TCTGTCGTGCTGGGGA-TAGAGCATTGCAATTATTGCTCTTCAACGAGGAA 274 || || || |||| | ||||| |||| ||||||| | | | || |||||| Sbjct 289191 TCATTCATGATGGGTATTAGAG-ATTGTAATTATTCCCCATGAATGAGGAA 289142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947126184704