Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq139 416 9e-114 seq86 194 5e-47 seq24 170 6e-40 seq8 125 2e-26 seq42 96.9 1e-17 seq1 95.1 4e-17 >seq139 Length=5252280 Score = 416 bits (460), Expect = 9e-114 Identities = 269/297 (91%), Gaps = 11/297 (4%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 326621 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 326562 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 326561 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 326502 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 326501 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCACGTCACTAATTAGATG 326442 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct 326441 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACT-----------CCTGCGCTTCA 326393 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 326392 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCACGTCAACA 326336 Score = 91.5 bits (100), Expect = 5e-16 Identities = 73/88 (83%), Gaps = 0/88 (0%) Strand=Plus/Minus Query 26 TTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCC 85 |||||| |||| |||| | |||||||||||||| |||| |||| |||| ||| | ||| Sbjct 326922 TTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGTGTTACTGTTTGACAGGTGTACTGCC 326863 Query 86 CCAGCCAAACTCCCCACCTGACAATGTC 113 |||| ||||||||||||||| || |||| Sbjct 326862 CCAGTCAAACTCCCCACCTGTCACTGTC 326835 >seq86 Length=8694004 Score = 194 bits (214), Expect = 5e-47 Identities = 225/297 (76%), Gaps = 10/297 (3%) Strand=Plus/Plus Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 || || ||||||||| ||||| | ||||| | | |||||||| |||||| ||| Sbjct 3600065 CCCCTCATTCTACACTTCTCAGACCTCTTCACTGTGCCAGACTAGAGCTGAGCTCAGCAG 3600124 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 ||||||| |||| | ||||||| | ||||||| |||| ||||||| | ||| | | Sbjct 3600125 GGTCTTCCTTCCACTCTGATTCTGTCAAGCCCACTCCCCTGGCTGTTCT---GCTGGGTC 3600181 Query 360 GT---AGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | || | |||||||||||||| | || | |||||| ||| | ||||||||| ||| Sbjct 3600182 ATCACAGGTCAGGACAGTGGGAATCGCATTCACCCATTCCTGCACAGCACTAATTAAATG 3600241 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 | ||||||||||||| || ||||||||| ||||||||| | || ||||| || | ||| Sbjct 3600242 AGGAGGCATTTGGCTGCCCTAAGAGAGTGATAGTTACTGCTGCTGTTTA-CCTCACTTCA 3600300 Query 477 TTGAATTTCTTCACTTT-GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAAC 532 | | | ||||||||||| ||||||| || |||||||| ||||| ||||| ||||| Sbjct 3600301 TCG-AGTTCTTCACTTTCGACATTCTGAATGCTGGGCAGGAATCA-ATTGCCTCAAC 3600355 >seq24 Length=22183420 Score = 170 bits (188), Expect = 6e-40 Identities = 213/294 (72%), Gaps = 10/294 (3%) Strand=Plus/Plus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||| ||||| | |||| ||| || |||| | | | || ||| |||||||||| Sbjct 20231274 TCCCCTTTATTACATACCTTTCATGTTTCTTCAAAGTGCCAGATTAGCATCAAGCTCAAT 20231333 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||| ||||| | |||| |||| | | | ||| | |||| || |||| | | || Sbjct 20231334 AGGGTCTACTTTCACAGCTGTTTCCACTATATCAGTTTCTTTGGTTGAAGTTTTGTTGGA 20231393 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 ||||| |||||||||||| |||||| | | | ||||| || |||||||||||||| Sbjct 20231394 TAGTACATAGGGACAGTGAGAATCTTGATCACCCATTTATATATATCACTAATTAGATGT 20231453 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 | |||||||||||| |||||||||| | || ||| |||| |||| Sbjct 20231454 CCAGGCATTTGGCTGCCTTAAGAGATTTAT----------GCCACCTACCTCAGCTTCAC 20231503 Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAA 531 ||||||||||||| |||||||| |||||| || |||||||||||| | |||| Sbjct 20231504 TGAATTTCTTCACATTGACATTTAGAGCATTGTATAGAAATCACATTTCATCAA 20231557 >seq8 Length=39804640 Score = 125 bits (138), Expect = 2e-26 Identities = 177/244 (73%), Gaps = 10/244 (4%) Strand=Plus/Minus Query 282 TAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 || ||||| | |||||| |||||||| ||| | | || ||||| ||| ||| ||||| Sbjct 25087173 TACAGTCAGGTCCAACAG--TCTTCTTTGCCCACAGGTTTTGCCAA-CCCATTCACTTGG 25087117 Query 342 CTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGC 401 |||||||||| ||||| || || |||| ||||| || | |||||||| | Sbjct 25087116 CTGTGGTTTCATCAGATAACAGGTAAAGACAAAAGGAATATCACACAACCATTCATACA- 25087058 Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC- 460 || || || ||||||| ||||||||||||||| |||| || | | | | | ||| | Sbjct 25087057 -TCTCTGATGAGATGACAAGGCATTTGGCTACCCTAAGGGACTTGTGGCTTCACCCATCA 25086999 Query 461 ---GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 |||| || | |||| || |||||||||| || | ||||||||||||||||| || Sbjct 25086998 TTTGTTTGCCTGGGCTTCCATGGATTTCTTCAC-TTCAAATTCAGAGCACTGGGCAAAAC 25086940 Query 518 TCAC 521 |||| Sbjct 25086939 TCAC 25086936 >seq42 Length=14541388 Score = 96.9 bits (106), Expect = 1e-17 Identities = 169/246 (69%), Gaps = 34/246 (14%) Strand=Plus/Plus Query 288 CAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGG 347 |||||||| |||||||||||||| | | ||| | | |||||||| ||||||||| |||| Sbjct 12864411 CAAGCTCAGCAGGGTCTTCTTTCTCTGTTGACT-CTCCAAGCCCAGTCCCTTGGCGGTGG 12864469 Query 348 TTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACT 407 | | || |||| || || |||||| |||||| | | ||||| ||| Sbjct 12864470 TGTTCCTGGATAAAAGGGTGGAACAGTGAGAATCTTGCTCATCCA-TCA----------- 12864517 Query 408 AATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACC 467 || ||| ||| || | ||| ||||| ||| |||||| || ||| || Sbjct 12864518 ----AGTTGA---------TGGGGAC--TTAGAAAGTCAAAGTCACTCCCACCATTTTCC 12864562 Query 468 CGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCG 527 | | | |||||||| |||||| ||||||||||||||||||| ||||||| | Sbjct 12864563 TACTC-TCATTGAATTT-----CTTTGATATTCAGAGCACTGGGCAGAGATCACATCATG 12864616 Query 528 TCAACA 533 |||||| Sbjct 12864617 TCAACA 12864622 >seq1 Length=73491278 Score = 95.1 bits (104), Expect = 4e-17 Identities = 66/74 (89%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 460 CGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 |||||||| | |||| || |||||||||||| |||||||||||||||||||||||||| Sbjct 30138806 CGTTTACCTGTGCTTCATTAAATTTCTTCACT--GACATTCAGAGCACTGGGCAGAAATC 30138749 Query 520 ACATTGCGTCAACA 533 ||||||| |||||| Sbjct 30138748 ACATTGCATCAACA 30138735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635072568864