Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq47 87.8 3e-15 seq32 82.4 1e-13 >seq47 Length=13852661 Score = 87.8 bits (96), Expect = 3e-15 Identities = 93/119 (78%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||| || | | |||||| | ||||| | || | || |||| || || | Sbjct 8488567 GTACGAGAGGACCCACAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 8488624 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCC 119 | |||||||||||||||| |||||||| ||| || ||||||||||||||||| |||| Sbjct 8488625 GGGGCGAAGCTACCATCTGTGGGATTATGACTGCACACCTCTAAGTCAGAATCC-TGCC 8488682 >seq32 Length=18668593 Score = 82.4 bits (90), Expect = 1e-13 Identities = 74/92 (80%), Gaps = 1/92 (1%) Strand=Plus/Plus Query 21 TTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGC 80 |||||| | ||||| | || | || |||| || || || |||||||||||||||| Sbjct 2794444 TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGT 2794502 Query 81 TGGATTATGGCTGAACGCCTCTAAGTCAGAAT 112 |||||||| |||||||||||||||||||||| Sbjct 2794503 GGGATTATGACTGAACGCCTCTAAGTCAGAAT 2794534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819138154752