Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq331 232 2e-58 seq230 149 2e-33 seq32 118 3e-24 >seq331 Length=417405 Score = 232 bits (256), Expect = 2e-58 Identities = 348/491 (71%), Gaps = 64/491 (13%) Strand=Plus/Minus Query 3 ACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 |||||||||||||||| ||| | |||||| ||||||| ||||| | | |||||||||| Sbjct 313786 ACTCATTCCAATTACAGGACTCGAAAGAGTCCTGTATTGTTATTTTTCGCCACTACCTCC 313727 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | | || ||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 313726 CTGGATCTGGAGTGGGTAATTTGCGCGCCTCCTGCCTTCCTTGGATGTGGTAGCCGTTTC 313667 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT-ACCATGGTAG 181 |||||||| ||||| |||||| ||||| ||||| || |||||| ||| ||||| |||| Sbjct 313666 TCAGGCTCACTCTCTGGAATCCAACCCGGATTCCAGGTCACCCGT-GATCACCATAGTAG 313608 Query 182 GCCACTATC-CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 || ||| ||||||||||| ||||||||| || ||||| | ||| | | Sbjct 313607 GC-ACTGCGACTACCATCGAA-------AGGGCAGAAGTTCGAATGGGTCGTCGTTGCCA 313556 Query 241 CAAGGCCATGCGATTCG-TTAAGTTATTATGAATCACCAAGG--AGCC------------ 285 | || | | || | | | ||||| || ||||||| | | || Sbjct 313555 CGGGGGGCTACCATCGGCTGAGGTTATCTAGAGTCACCAAAGCCACCCACGCCCGCCTCC 313496 Query 286 ---------CCGAAGGG----------CGTTGGTTTTTTATCTAATAAAT----ACACCC 322 ||| |||| ||||| |||| |||| |||||| ||| || Sbjct 313495 CGGCTGGGGCCGGAGGGGAGCTCACCAGGTTGG-TTTTGATCTGATAAATGCACACATCC 313437 Query 323 CTTCCGAAGTCGGGGT-------TTTTAGCATGTATTAGCTCTAGAATTACCACGGTTAT 375 | || || ||||| | |||||||||||||||| ||||||||| ||||| Sbjct 313436 CCCCCCCAG--GGGGTCAGCGCCCCTCGGCATGTATTAGCTCTACAATTACCACAGTTAT 313379 Query 376 CCATGTAGTA-AGGTAC----TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCA 430 ||| |||| | ||| | | |||| ||| |||||||||||||||||||||||||| Sbjct 313378 CCAAGTAGGAGAGGAGCGAGTGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGCA 313319 Query 431 GTTTCACTGTA 441 ||||||||||| Sbjct 313318 GTTTCACTGTA 313308 >seq230 Length=2054077 Score = 149 bits (164), Expect = 2e-33 Identities = 369/546 (68%), Gaps = 57/546 (10%) Strand=Plus/Minus Query 7 ATTCCAATTACA-AGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCG 65 |||||||||| | || | |||| | ||||||| || || | ||| |||||||| Sbjct 2023051 ATTCCAATTATAGAGCCTCAAAGGGTTCCTGTATTGTTACTTTTCACCACAACCTCCCCA 2022992 Query 66 TGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCA 125 | |||| ||||| ||||| | ||||| ||||| |||||||||||||| || ||| ||| Sbjct 2022991 AGATGGGAGTGGGTGATTTGTGTGCCTGTTGCCTGCCTTGGATGTGGTACCCATTTTTCA 2022932 Query 126 GGCTCCCTCTCCGGAATCGAACC-----CTAATTCCCCGTTACC---CGTTGATACC--A 175 |||||||||||| ||| |||| || || || | | | |||| || | Sbjct 2022931 GGCTCCCTCTCCATAATTGAACTTCAGGCTCCCTCTCCATAATTGAGCTGTGATTCCCCA 2022872 Query 176 TG----GTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCA 231 | || | ||| | | || | | ||||||||||||||||| || |||| || Sbjct 2022871 TCACCCGTGGTCCAGCAAC-TAGCCTTAAAAGTTGATAGGGCAGATGTTGAAATGGGACA 2022813 Query 232 TCGCCGGCTCAAGGC----CATGCGATTCG--TTAAGTTAT-TATGAA----TCACCA-- 278 || | | | |||| ||||| || | | | ||||| || | | || ||| Sbjct 2022812 TCACTGCC--AAGGTGGGGCATGCAATCAGCCTGAGGTTATCTAAGCACCCATCCCCAGT 2022755 Query 279 ---AGGAGCCCCGAAGGGC-------GTTGGTTTTTTATCTAATAAATACACCCCTTCCG 328 ||| | || | || ||||||||| |||||| |||| ||| | | || Sbjct 2022754 CCCAGGGCTGCAGAGGAGCTCACCAGGTTGGTTTTG-ATCTAAGAAATGCACACATCCCC 2022696 Query 329 --AAGTCGGGGTTT-------TTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCAT 379 | || |||| | ||||||| | |||| ||||||| ||| ||||||| Sbjct 2022695 CCACAAAGGAGTTTGCACCCATCAGCATGTCTGAGCTATAGAATTGTCAC--TTATCCAA 2022638 Query 380 GTAGTAAGGTACT-ATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACT 438 | ||| | | | |||| ||| ||||||||||||||||| ||||| ||||||| || Sbjct 2022637 ACTGCAAG--AGTGACCAAAGGAACCATAACTGATTTAATGAGTCATTCACAGTTTCTCT 2022580 Query 439 GTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAC 498 ||| | ||| | |||||| ||||||||||||||||||||||||||| ||||| |||| Sbjct 2022579 GTACAAGCTGCATGTACTTAAACATGCATGGCTTAATCTTTGAGACAAAGATATG-CTAC 2022521 Query 499 TGGCAG 504 |||||| Sbjct 2022520 TGGCAG 2022515 >seq32 Length=18668593 Score = 118 bits (130), Expect = 3e-24 Identities = 117/149 (79%), Gaps = 7/149 (5%) Strand=Plus/Plus Query 344 GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA-AGGTACTATCAAATAAA 402 ||||||||| ||||||||||||||| |||||||| |||| | ||| | | ||| ||| Sbjct 3385449 GCATGTATTTGCTCTAGAATTACCA--GTTATCCAAGTAGGAGAGGAGCAAGCAACCAAA 3385506 Query 403 CGA----TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTA 458 || |||||||||||| |||||| |||||||||||||| | | | | ||| Sbjct 3385507 GGAGCCATAACTGATTTAAGGAGCCACCTGCAGTTTCACTGTACCAGTCACATGCATTTA 3385566 Query 459 GACATGCATGGCTTAATCTTTGAGACAAG 487 ||||||||||||||||||| ||||||||| Sbjct 3385567 GACATGCATGGCTTAATCTCTGAGACAAG 3385595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510282294528