Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Otolemur_20garnettii_20[refseq_20GCF_5F000181295.1_202011-03-16] 7,793 sequences; 2,519,724,550 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq126 134 1e-26 seq4 105 5e-18 seq1 102 6e-17 >seq126 Length=6050536 Score = 134 bits (148), Expect = 1e-26 Identities = 570/884 (64%), Gaps = 31/884 (4%) Strand=Plus/Minus Query 61066 TTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGG 61125 || || ||||| || | || ||||||| ||||| || || ||||| | || || ||| Sbjct 4679161 TTTCCTATCGAATACCATGACATTTGGCAAATGTATAAGAAAGCGGAGGTGTCTTTGTGG 4679102 Query 61126 ACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGG-AGCGTTTATCGAGCGG 61184 |||| |||||||| ||| | || || ||||| | |||||| | | || | | | Sbjct 4679101 ACGGCTGAGGAGGTGGATCTTTCTAAGGACATTCAGCACTGGGCAACCTTGAA-GCCCAA 4679043 Query 61185 TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAA 61244 || | | ||||| |||||| |||| || || || || || || || || || Sbjct 4679042 AGAGAGATACTTCATATCACATGTTCTGGCTTTTTTCGCAGCAAGTGATGGCATAGTAAA 4678983 Query 61245 TGAGAATTTATTGGAACG-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 ||| || || ||||||| ||| || || || || || | | ||||| |||||||||| Sbjct 4678982 TGAAAACTTGGTGGAACGATTTAGC-CAAGAAGTTCAGATTACAGAGGCCCGTTGTTTCT 4678924 Query 61304 ACGGC---------TTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTC 61354 | || | ||| ||||||||||| || | || || || ||||| ||| | | Sbjct 4678923 ATAGCCATAGAAATTGCCAAATTGCCATGGAAAACATTCATTCTGAAATGTATAGTCTCC 4678864 Query 61355 TCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGAGA 61414 | || || || ||||| | || ||| | ||| | |||||||| || || | Sbjct 4678863 TTATTGACACTTACATTAAAGATTCCCAAGAAAGGGAATTTCTCTTCAATGCTATTGAAA 4678804 Query 61415 CGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAGTACAA--C 61472 || | || ||| ||| || | | ||||||| |||||| | |||| Sbjct 4678803 TAATGCTTTGTGTCAAGAAGAAGGCAGCTGGGGCCTTGCGTTGGAT--TGGGGACAAAGA 4678746 Query 61473 GGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTGG 61532 |||||| | ||| ||||| | | || ||||| | || || || | ||||| ||| Sbjct 4678745 GGCTACCTATGGAGAACGTGTTGTAGCCTTTGCAGCAGTGGAAGGAATCTTTTTTTCTGG 4678686 Query 61533 ATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAG 61592 || |||||| |||| || ||| | |||||||| ||||| ||||| || | || || Sbjct 4678685 TTCTTTTGCCTCAATATTCTGGCTCAAGAAACGAGGACTGATGCCTGG-CCCACATTTTC 4678627 Query 61593 CAATG-AGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 ||||| | || || || | || ||||| | || ||||| ||||| || | ||| Sbjct 4678626 CAATGAACTTATTAGCA-GAGATGAGGGTTTACACTGTGACTTTGCCTGACTGATGCTCA 4678568 Query 61652 AACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGAT--TGTTC-GTGAGG 61708 ||| | |||| | ||||||||| || | || || || || | || | Sbjct 4678567 AAC---ACCTGGGACACAAACCGTCGGAGCAGAGAGTAAAAGAAATAATGACCAGT---G 4678514 Query 61709 CGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGA 61768 | || | | | |||||| || || ||||| || ||||| | ||||| || ||| Sbjct 4678513 CTGTTAGGCTAGGACAGGAGTTCCTCACTGAGGCCTTGCCTGGGAAGCTCATTGGGATGG 4678454 Query 61769 ATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGG 61828 | | | ||||| |||| | ||||| || || || ||| || || | || ||| Sbjct 4678453 ACTACACATTAATGAAGCAGGACATTGAGTTGGTGGCGGACACACTTATGCTGGAACTGG 4678394 Query 61829 GTATGAAGCGGATCTATAATACGA-AAAACCCATTTGATTTCATGGACATGATTTCGCTG 61887 || | | | | | | | | | |||| || ||||| || ||||| ||||| ||| Sbjct 4678393 GTTTCCACAAGGT-TTTCAGAGTAGAAAATCCGTTTGACTTTATGGAGGATATTTCACTG 4678335 Query 61888 GATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCA 61931 || || ||||| || || || ||||| | |||||| | ||||| Sbjct 4678334 GACGGAAAGACTAACTTCTTTGAGAAGAGAGTAGGCAAATATCA 4678291 >seq4 Length=47749213 Score = 105 bits (116), Expect = 5e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||||||||| ||||||||||| || | ||||| || |||||||| ||||| || | Sbjct 24669082 TGGAACGTTTTAGTCAGGAGGTGCAGGTTCCAGAGGCTCGCTGTTTCTATGGCTTTCAAA 24669141 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 || ||| |||||||| ||||| |||||||||||| | || || || || |||||||| | Sbjct 24669142 TTCTCATCGAGAATGTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAG 24669201 Query 61376 A 61376 | Sbjct 24669202 A 24669202 >seq1 Length=73491278 Score = 102 bits (112), Expect = 6e-17 Identities = 109/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 |||||| || || | ||| |||||||| || ||||| ||||| |||| ||||| || Sbjct 30997197 GGTATATTCTACTACTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTG 30997138 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || || || ||||| || | ||| ||||||| |||||| || || || ||||| || Sbjct 30997137 GTTGCTTTTCCGATTACAAGAATCTTTGTACAGCATGTATGGGGTTCCTGTCTCTGTCTG 30997078 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 30997077 AGACTCAATGATGGCATACCAAAG 30997054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397530240109520