Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9244 244 2e-62 seq9209 244 2e-62 seq7814 241 2e-61 seq2260 239 7e-61 seq9875 203 5e-50 seq7090 196 8e-48 seq6 168 1e-39 seq2265 163 5e-38 seq9178 150 3e-34 seq2337 150 3e-34 seq15 143 4e-32 seq12 100 5e-19 >seq9244 Length=1058 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 1058 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 1000 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 999 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 941 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 940 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 881 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 880 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 821 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 820 ATCAATCTGTC 810 >seq9209 Length=1036 Score = 244 bits (270), Expect = 2e-62 Identities = 208/251 (83%), Gaps = 9/251 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 107 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 165 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 166 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 224 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 225 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 284 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 285 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 344 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 345 ATCAATCTGTC 355 >seq7814 Length=1034 Score = 241 bits (266), Expect = 2e-61 Identities = 207/251 (82%), Gaps = 9/251 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 787 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 729 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 728 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGACGCCGACCGCT 670 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||||||||||||||||||||||||||| Sbjct 669 CGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 610 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||| Sbjct 609 AAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCT 550 Query 248 ATCAATCTGTC 258 | ||||||||| Sbjct 549 AGCAATCTGTC 539 >seq2260 Length=1037 Score = 239 bits (264), Expect = 7e-61 Identities = 208/252 (83%), Gaps = 10/252 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | Sbjct 681 GTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 623 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA-GAAGCCAGC---CACCAACCA- 129 ||| || | |||||| | |||| | |||||||||| |||| | | || ||| Sbjct 622 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAACGAAGTTGGGGGACGCCGACCGC 564 Query 130 TAGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 | | | | | | ||| |||||| | | |||||||||||||||||||||||||||| Sbjct 563 TCGGGGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGA 504 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 |||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||| Sbjct 503 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGC 444 Query 247 TATCAATCTGTC 258 |||||||||||| Sbjct 443 TATCAATCTGTC 432 >seq9875 Length=63937927 Score = 203 bits (224), Expect = 5e-50 Identities = 199/252 (79%), Gaps = 15/252 (6%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||| | Sbjct 195113 GTCAGTGTAGCGCGCGTGCAGCCCTGGACATTTAAGGGCATCACAGACCTGTTATTGC-T 195055 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG-------CCACCAA- 126 ||| || | |||||| | |||| | |||||||||||||| | | ||| Sbjct 195054 CAATCT-CAGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGGGGATGCCGACCGCT 194996 Query 127 CCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186 || ||| | ||| || ||| | | |||||||||||||| ||||||||||||| Sbjct 194995 CCGGGGTC-ACATAACTAGTTGGCATGCCAGAGTCTCGTTCGTTATTGGAATTAACCAGA 194937 Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGC 246 |||||||||||| ||||||| |||||||||||||||||| | ||||| ||||||||| Sbjct 194936 CAAATCACTCCAGCAACTAA----GGCCATGCACCACCACCCGTGGAATCGAGAAAGAGC 194881 Query 247 TATCAATCTGTC 258 |||||||||||| Sbjct 194880 TATCAATCTGTC 194869 Score = 203 bits (224), Expect = 5e-50 Identities = 199/251 (79%), Gaps = 13/251 (5%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||| |||| |||| | ||||||||||||||||||||||| ||||||| | Sbjct 309470 GTCAGTGTAGCGCATGTGCAGCCCTGGACATCTAAGGGCATCACAGACCTATTATTGC-T 309528 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC---CACCAACCA-T 130 || |||| |||||| | |||| | |||||||||||||| | | || ||| | Sbjct 309529 CAGT-TTCCGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGTGGACGCCGACCGCT 309587 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | | ||| |||||| | | ||||| || |||||||||||||||||||| Sbjct 309588 CGGGGGTCGTGTAACTAGTTAGCATGCCAGAGTCTCCTTGGTTATCGGAATTAACCAGAC 309647 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||||||||||||||||| |||||||||||||||||||| ||| |||||||||| Sbjct 309648 AAATCACTCCACCAACTAA----GGCCATGCACCACCACCCATGGAACAGAGAAAGAGCT 309703 Query 248 ATCAATCTGTC 258 ||||||||||| Sbjct 309704 ATCAATCTGTC 309714 Score = 190 bits (210), Expect = 3e-46 Identities = 196/251 (78%), Gaps = 13/251 (5%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| |||| ||| |||| | |||| |||||||||||||||||||||||||| | Sbjct 184242 GTCAGTGTAGTGCGCATGCAGCCCTGGACATTTAAGGGCATCACAGACCTGTTATTGC-T 184184 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAACCA-T 130 ||| || | |||||| | |||| | |||||||||||| | | || |||| | Sbjct 184183 CAATCT-CAGGTGGCTGAACGCCACTTGTCCCTCTAAGATGTTGGGGGATGCCGACCACT 184125 Query 131 AGTCGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | | | | |||||| ||| | | |||| |||||||||||||||||||||||| Sbjct 184124 TGGGGGTCGCATAACTATTTGGCATGCCAGAGTCTTGTTCGTTATCGGAATTAACCAGAC 184065 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCT 247 ||||||||||||||||||| |||| |||||||| || ||| ||||| |||||||||| Sbjct 184064 AAATCACTCCACCAACTAA----GGCCGTGCACCACAACTCATGGAATCGAGAAAGAGCT 184009 Query 248 ATCAATCTGTC 258 |||||||| || Sbjct 184008 ATCAATCTATC 183998 >seq7090 Length=2896 Score = 196 bits (216), Expect = 8e-48 Identities = 199/255 (78%), Gaps = 21/255 (8%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||||||||||||| | || | |||||||||||||||||||| |||||||||| | Sbjct 1796 GTCAGTGTAGCGCGCGTGCAGTCCCGGACATCTAAGGGCATCACAGATCTGTTATTGC-T 1738 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAACCATA 131 ||| ||| |||||| | |||| | |||||||||||||| | || ||| Sbjct 1737 CAAT-TTCGGGTGGCTGAAGGCCACTTGTCCCTCTAAGAAGTTGGGGGATGCCGACCGC- 1680 Query 132 GTCGATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACC 183 ||| |||| ||| |||||| | | |||||||| ||||||||||||||| Sbjct 1679 -TCG--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCGTTGGTTATCGGAATTAACG 1623 Query 184 AGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAG 243 ||||||||||||||||||||||| |||||||||||||||||||| ||| ||||| Sbjct 1622 AGACAAATCACTCCACCAACTAA----GGCCATGCACCACCACCCATGGAACAGAGAAAT 1567 Query 244 AGCTATCAATCTGTC 258 ||||||||||||||| Sbjct 1566 AGCTATCAATCTGTC 1552 >seq6 Length=183735486 Score = 168 bits (186), Expect = 1e-39 Identities = 190/248 (77%), Gaps = 11/248 (4%) Strand=Plus/Plus Query 19 GTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAA 78 |||||| || ||||| |||| | || || | || ||||||||||||||||||| ||| Sbjct 177358121 GTGTAGTGCACGTGCAGCCCCAGATATATATGAGCGTCACAGACCTGTTATTGCC-CAAT 177358179 Query 79 CTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC----CATA 131 ||| | ||| | ||| | |||| |||||||||| | ||||| || Sbjct 177358180 CTTGGGTCA-CTGAACACCACTTGTCCTTCTAAGAAGCTGGGGGATGCCAACTGCTCAGG 177358238 Query 132 G-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 | ||| || | | | |||| | | ||||| |||| ||||| |||||||||||||||| Sbjct 177358239 GATCG-TGTAACCAGTCAGCATGCCAGGGTCTGGTTCCTTATCAGAATTAACCAGACAAA 177358297 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 || |||||||||||||||| |||||||||||||||||||||||||| |||||||||| || Sbjct 177358298 TCGCTCCACCAACTAAGAATGGCCATGCACCACCACCCATAGAATCGAGAAAGAGCTGTC 177358357 Query 251 AATCTGTC 258 |||||||| Sbjct 177358358 AATCTGTC 177358365 >seq2265 Length=1067 Score = 163 bits (180), Expect = 5e-38 Identities = 104/113 (92%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 |||||| | | |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1066 TTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTA 1007 Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 1006 AGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTC 954 >seq9178 Length=1174 Score = 150 bits (166), Expect = 3e-34 Identities = 93/98 (95%), Gaps = 1/98 (1%) Strand=Plus/Minus Query 161 CTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCAC 220 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 1174 CTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAAC-GCCATGCAC 1116 Query 221 CACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| ||||| ||||||||||||||||||||| Sbjct 1115 CACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTC 1078 >seq2337 Length=1018 Score = 150 bits (166), Expect = 3e-34 Identities = 105/117 (90%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | ||||||| |||||||||||||||||||||||||| |||||||| Sbjct 1 CTAGTTAGCATGCCAGAGTCTCGT-CGTTATCGGAATTAACCAGACAAATCGCTCCACCA 59 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 60 ACTAAGAAC-GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTC 115 >seq15 Length=107357366 Score = 143 bits (158), Expect = 4e-32 Identities = 160/212 (75%), Gaps = 9/212 (4%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||| || | ||| |||| | |||||||||||||||||||||||||||||| || Sbjct 89845730 GTCAGTGTAGTGCACATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 89845788 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAG-------CCACCAAC 127 ||| | || |||||| | |||| | |||||||||||||| | || Sbjct 89845789 CAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGGATGCTGACTGCT 89845847 Query 128 CATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187 | || || ||| |||||| | | |||| |||||||||||||||||| ||||| Sbjct 89845848 CGGGGTTCGTGTAACTAGTTAGCATGCCACAGTCTTGTTCGTTATCGGAATTAAACAGAC 89845907 Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219 |||| |||||| ||||||||||| |||||||| Sbjct 89845908 AAATTACTCCATCAACTAAGAACTGCCATGCA 89845939 >seq12 Length=134183262 Score = 100 bits (110), Expect = 5e-19 Identities = 90/117 (77%), Gaps = 16/117 (14%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | || ||||| || ||||||||||||||||||||||| Sbjct 46273195 CTAGTTAGCATTTCAAAGTCTCATTTGTTATCGGAATTAACCAGACAAA----------- 46273243 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||| ||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 46273244 -----GAATGGCCATGCACCACCACCCACAGAATTGAGAAAGAGCTATCAATCTGTC 46273295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796720694994