Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20paniscus_20[refseq_20GCF_5F000258655.2_202015-08-18] 10,274 sequences; 3,286,643,896 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq9875 91.5 2e-16 seq9244 82.4 9e-14 seq9209 82.4 9e-14 seq9178 82.4 9e-14 seq2337 82.4 9e-14 seq2322 82.4 9e-14 seq2270 82.4 9e-14 seq2241 82.4 9e-14 seq2015 82.4 9e-14 seq7814 78.8 1e-12 seq2265 77.0 4e-12 seq2291 75.2 1e-11 seq7090 73.4 5e-11 >seq9875 Length=63937927 Score = 91.5 bits (100), Expect = 2e-16 Identities = 82/101 (81%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| |||| ||||||||| ||||||||| ||| |||| | || | Sbjct 183613 AAACCAACAAAATAGAATCGCA-GTCCTATTCCATTATTCCAAGCTGCAGTATCCAGGTG 183555 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | |||||||||||||||||||||||| |||| ||||| Sbjct 183554 GCTTGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 183514 Score = 80.6 bits (88), Expect = 3e-13 Identities = 113/153 (74%), Gaps = 7/153 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| ||||||||| ||| |||| | ||| Sbjct 194471 AAACCAACAAAATAGA-ACTGTGGTCCTATTCCATTATTCCAAGCTGCAGTATCCAGGCA 194413 Query 70 ---TAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGCAC 126 | ||||||||| |||||||||||||| |||| ||||| | | | | || | | || Sbjct 194412 GCTTGGGCCTGCTTTCAACACTCTAATTTTTTCAAAGTAAATG-CTTCGGGCCACAGGAC 194354 Query 127 AC-CAATGAAG-GCATACGGGCTCACCAAGAGG 157 || || ||| |||| |||| |||| ||||| Sbjct 194353 ACTCAGCTAAGAGCATCCGGGGGCACCGAGAGG 194321 >seq9244 Length=1058 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 418 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 360 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 359 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 319 >seq9209 Length=1036 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 748 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 806 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 807 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 847 >seq9178 Length=1174 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 686 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 628 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 627 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 587 >seq2337 Length=1018 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 507 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 565 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 566 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 606 >seq2322 Length=1088 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 421 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 479 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 480 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 520 >seq2270 Length=1101 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 390 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 448 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 449 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 489 >seq2241 Length=1022 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 877 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 819 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 818 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 778 >seq2015 Length=1128 Score = 82.4 bits (90), Expect = 9e-14 Identities = 80/101 (79%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 940 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 882 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 881 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 841 >seq7814 Length=1034 Score = 78.8 bits (86), Expect = 1e-12 Identities = 80/101 (79%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 147 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 89 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 88 GCTCGGGCCTGCTTTGAACACTCTAATTTT-TCAAAGTAAA 49 >seq2265 Length=1067 Score = 77.0 bits (84), Expect = 4e-12 Identities = 78/101 (77%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||| |||||||| ||| |||| | |||| Sbjct 561 AAACCAACAAAATAGAACCGCGGTACCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 502 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 501 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 461 >seq2291 Length=1111 Score = 75.2 bits (82), Expect = 1e-11 Identities = 79/101 (78%), Gaps = 5/101 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| ||| ||||||||| |||||||| ||| |||| | |||| Sbjct 337 AAACCAACAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 395 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||| |||||| |||| ||||| Sbjct 396 GCTCGGGCCTGCTTTGAACACTC-AATTTTTTCAAAGTAAA 435 >seq7090 Length=2896 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 |||||| |||||||| ||| ||||||||| |||||||| ||| |||| | || | Sbjct 1152 AAACCAGCAAAATAGAACCGCG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGTG 1094 Query 70 --TAAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | | ||||||||||||||||||||||| |||| ||||| Sbjct 1093 GCTCGGACCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 1053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595140760116