Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq4061 174 2e-41 seq1651 125 1e-26 seq1044 125 1e-26 seq1395 120 5e-25 seq1197 109 8e-22 seq148 105 1e-20 seq1403 102 1e-19 seq1657 96.9 5e-18 seq252 93.3 6e-17 seq1113 78.8 1e-12 seq41800 77.0 5e-12 >seq4061 Length=12628 Score = 174 bits (192), Expect = 2e-41 Identities = 182/234 (78%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || ||||||| ||||| ||||| ||| |||||| |||||| | Sbjct 7980 GTACAAAGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCGCACTTACTGGGAATT-C 8037 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| | ||||||||||||| ||||| | || Sbjct 8038 CTCGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCAACGGGTT 8097 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| |||| ||| | || || ||| |||||||||||||||||| Sbjct 8098 ACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 8157 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 8158 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 8210 >seq1651 Length=26350515 Score = 125 bits (138), Expect = 1e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| ||||| || ||| || |||||| | Sbjct 2391886 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCGGCACTTCCTGGGAATT-C 2391943 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 2391944 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 2392003 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 2392004 ACCCGCACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 2392063 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 2392064 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 2392101 Score = 125 bits (138), Expect = 1e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| ||||| || ||| || |||||| | Sbjct 11117055 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCGGCACTTCCTGGGAATT-C 11117112 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 11117113 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 11117172 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 11117173 ACCCGCACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 11117232 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 11117233 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 11117270 Score = 125 bits (138), Expect = 1e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| ||||| || ||| || |||||| | Sbjct 11617249 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCGGCACTTCCTGGGAATT-C 11617192 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 11617191 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 11617132 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 11617131 ACCCGCACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 11617072 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 11617071 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 11617034 Score = 125 bits (138), Expect = 1e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| ||||| || ||| || |||||| | Sbjct 15533692 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCGGCACTTCCTGGGAATT-C 15533749 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 15533750 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 15533809 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 15533810 ACCCGTACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 15533869 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 15533870 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 15533907 Score = 125 bits (138), Expect = 1e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| ||||| || ||| || |||||| | Sbjct 16016944 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCGGCACTTCCTGGGAATT-C 16016887 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 16016886 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 16016827 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 16016826 ACCCGTACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 16016767 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 16016766 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 16016729 Score = 122 bits (134), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| || || || ||| || |||||| | Sbjct 2891468 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATAACCGGCACTTCCTGGGAATT-C 2891411 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 2891410 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 2891351 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 2891350 ACCCGCACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 2891291 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 2891290 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 2891253 Score = 104 bits (114), Expect = 4e-20 Identities = 184/259 (71%), Gaps = 16/259 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||| | | || || | ||||| ||| |||||| |||||| | Sbjct 15302245 GTACAAAGGGTAGGGACTTCAT----GCAAGTCT-ATGACCCGCACTTACTGGGAATT-C 15302192 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || || | | || ||||||||| | ||| ||||||| ||| || | || ||| Sbjct 15302191 GTCATTCATGGGGAATAATTGCAATCCCCGATCACCATCACAATGGTGTTCAACAGGTTA 15302132 Query 121 CCCGGACCTGTCGGCCA-AGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||| ||| |||| | | ||| || || ||| |||||| ||| |||||| Sbjct 15302131 CCCGC----GTCTGCCACATACGGTAGGCACACGCTGAGCCAGTCAGTGCAGCACGCGTG 15302076 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 | |||| | ||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct 15302075 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT-TCTCAATCTCGGGTGG-CTAA 15302018 Query 238 AAGGC-CATCTCCCTCGAA 255 | | | | | |||||| || Sbjct 15302017 ATGCCACTTATCCCTCTAA 15301999 Score = 104 bits (114), Expect = 4e-20 Identities = 184/259 (71%), Gaps = 16/259 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||| | |||| || | ||||| ||| |||||| |||||| | Sbjct 16232273 GTACAAAGGGTAGGGACTTC----ACGCAAGTCT-ATGACCCGCACTTACTGGGAATT-C 16232326 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || || | | || ||||||||| | ||| ||||||| ||| || | || ||| Sbjct 16232327 GTCATTCATGGGGAATAATTGCAATCCCCGATCACCATCACAATGGTGTTCAACAGGTTA 16232386 Query 121 CCCGGACCTGTCGGCCA-AGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||| ||| ||| | | ||| || || ||| |||||| ||| |||||| Sbjct 16232387 CCCGC----GTCTACCACATACGGTAGGCACACGCTGAGCCAGTCAGTGCAGCACGCGTG 16232442 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 | |||| | ||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct 16232443 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT-TCTCAATCTCGAGTGG-CTAA 16232500 Query 238 AAGGC-CATCTCCCTCGAA 255 | | | | | |||||| || Sbjct 16232501 ATGCCACTTATCCCTCTAA 16232519 Score = 104 bits (114), Expect = 4e-20 Identities = 184/259 (71%), Gaps = 16/259 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||| | |||| || | ||||| ||| |||||| |||||| | Sbjct 16265528 GTACAAAGGGTAGGGACTTC----ACGCAAGTCT-ATGACCCGCACTTACTGGGAATT-C 16265581 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 || || | | || ||||||||| | ||| ||||||| ||| || | || ||| Sbjct 16265582 GTCATTCATGGGGAATAATTGCAATCCCCGATCACCATCACAATGGTGTTCAACAGGTTA 16265641 Query 121 CCCGGACCTGTCGGCCA-AGGTGATAG--ACTCGTTGAATACATCAGTGTAGCGCGCGTG 177 |||| ||| ||| | | ||| || || ||| |||||| ||| |||||| Sbjct 16265642 CCCGC----GTCTACCACATACGGTAGGCACACGCTGAGCCAGTCAGTGCAGCACGCGTG 16265697 Query 178 CGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAA 237 | |||| | ||||||||||||||||||||||||||||| ||||| || |||| |||| Sbjct 16265698 CAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT-TCTCAATCTCGAGTGG-CTAA 16265755 Query 238 AAGGC-CATCTCCCTCGAA 255 | | | | | |||||| || Sbjct 16265756 ATGCCACTTATCCCTCTAA 16265774 Score = 96.9 bits (106), Expect = 5e-18 Identities = 168/238 (71%), Gaps = 20/238 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || | || ||||| ||||| | | |||||| |||||| | Sbjct 7294005 GTACAAAGGGCAGGGACTTAAT----GCAAGCTT-ATGACCCACACTTACTGGGAATTGC 7294059 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 | || | | || ||||||||| | || |||||||| |||| ||||| | Sbjct 7294060 TTA-TTCATGGGGAATAATTGCAATCTCCCATTCCCATCAC----AAATGGGGTTCAACG 7294114 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||||| ||||| | || ||| | || || ||| ||||||| | | | Sbjct 7294115 GGTTACCCTCACCTGCCAGCATAGGGTAGGCACACGCTGAGC----CAGTGTAACACACA 7294170 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | || | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 7294171 TGCAGTCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 7294227 >seq1044 Length=27883 Score = 125 bits (138), Expect = 1e-26 Identities = 161/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 || |||||||||||||| || |||| || ||||| ||||| || ||| || |||||| | Sbjct 9221 GTGCAAAGGGCAGGGACTTAATCAATGCAAGCTT-ATGACCGGCACTTCCTGGGAATT-C 9278 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 ||| || | | || ||||||||| | |||||||||| || ||||| | || Sbjct 9279 CTCCTTCATGGGGAATAATTGCAATCCCCAATCCCCATCATGAATGGGGTTCAATGGGTT 9338 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | || | ||| |||||||||| | ||||| Sbjct 9339 ACCCGCACCTGCCAGCATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCACACGTGCA 9398 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 | || | ||||||||||||||||||||||||||||||| Sbjct 9399 GACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 9436 >seq1395 Length=66533130 Score = 120 bits (132), Expect = 5e-25 Identities = 171/234 (73%), Gaps = 9/234 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | |||| ||||| ||||| ||| ||||| |||||| | Sbjct 31148539 GTACAAAGGGCAGGGACTTC----ACGCAAGCTT-ATGACCCGCATTTACTGGGAATT-C 31148592 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 |||||| | | || ||||||||| | ||| ||||| | | | ||||| || || Sbjct 31148593 CTCGTTCATGGGGAAAAATTGCAATCCCCGATCACCATCGCCAATGAGGTTCAACAGGTT 31148652 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| | | ||| | || || ||| ||||||||| |||||||| Sbjct 31148653 ACCCACATCTGCCACATAGGGT-AGGCACACGCTGAGCCAGTCAGTGTAGTGCGCGTGCA 31148711 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||| ||||||||||||||||||||||||| ||||| || ||||| Sbjct 31148712 GCCCTGGACATTTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCAGGTGGC 31148764 Score = 102 bits (112), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 10/219 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||| ||||||||||| | | | ||||| ||||| ||| |||||| |||| ||| Sbjct 30933367 GTACACAGGGCAGGGACTTC----AGGTAAGCTT-ATGACCCGCACTTACT-GGAAATTC 30933314 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||| || | | || ||||||||| | ||||||||||||| |||| || || Sbjct 30933313 CTCCTTCATGGGGAATAATTGCAATCCCCCATCCCCATCACGAATGGGGTTCAGCAGGTT 30933254 Query 120 ACCCGGACCTGTCGGCCAAGGT-GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||| | | ||| | | || | ||| |||||||||||| ||||| Sbjct 30933253 ACCCGCCTCTGCCACGTAGGGTAGGCAAACAC--TGAGCCAGTCAGTGTAGCGCACGTGC 30933196 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||| ||||||| Sbjct 30933195 AGCCCTGGACATCTAAGGGCATCACAGACCTATTATTGC 30933157 >seq1197 Length=81586097 Score = 109 bits (120), Expect = 8e-22 Identities = 166/226 (73%), Gaps = 19/226 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||| ||||||||||| | | || ||||| ||||| ||| |||||| |||| ||| Sbjct 34809893 GTACATAGGGCAGGGACTTC----AGGCAAGCTT-ATGACCCGCACTTACT-GGAAATTC 34809946 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||| || | | || ||||||||| | ||||||||||||| ||||| || || Sbjct 34809947 CTCCTTCATGGGGAATAATTGCAATCCCCCATCCCCATCACGAATGGGGTTCAACAGGTT 34810006 Query 120 ACCCGGACCTGTCGGCCAAGGTGA-TAG--ACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||| | ||| | |||| | | ||| || || ||| ||||||||||||||| Sbjct 34810007 ACCTG--CCTCT--GCCACGTAGGGTAGGCACACGCTGAGC----CAGTGTAGCGCGCGT 34810058 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAA 222 || | || | |||||||||||||||||||| ||||||||| ||||| Sbjct 34810059 GCAGTCCCGGACATCTAAGGGCATCACAGATCTGTTATTG-CTCAA 34810103 >seq148 Length=133216015 Score = 105 bits (116), Expect = 1e-20 Identities = 168/234 (72%), Gaps = 9/234 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | |||| ||||| ||||| || |||||| |||||| | Sbjct 21864867 GTACAAAGGGCAGGGACTTC----ACGCAAGCTT-ATGACCAGCACTTACTGGGAATT-C 21864920 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||| || | | || |||||||| ||| |||| | | | ||||| || || Sbjct 21864921 CTCATTCATGGGGAAAAATTGCAACCCCTGATCACCATTGCCAATGAGGTTCAACAGGTT 21864980 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||| | ||| | | ||| | || || ||| |||||||||||||||||| Sbjct 21864981 ACCCACATCTGCCACATAGGGT-AGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCA 21865039 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||| ||||||||||||||||||||||||| ||||| || ||||| Sbjct 21865040 GCCCTGGACATTTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCAGGTGGC 21865092 >seq1403 Length=321896 Score = 102 bits (112), Expect = 1e-19 Identities = 158/219 (72%), Gaps = 10/219 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||| ||||||||||| | | | ||||| ||||| ||| |||||| |||| ||| Sbjct 297654 GTACACAGGGCAGGGACTTC----AGGTAAGCTT-ATGACCCGCACTTACT-GGAAATTC 297601 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||| || | | || ||||||||| | ||||||||||||| |||| || || Sbjct 297600 CTCCTTCATGGGGAATAATTGCAATCCCCCATCCCCATCACGAATGGGGTTCAGCAGGTT 297541 Query 120 ACCCGGACCTGTCGGCCAAGGT-GATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||||| ||| | | ||| | | || | ||| |||||||||||| ||||| Sbjct 297540 ACCCGCCTCTGCCACGTAGGGTAGGCAAACAC--TGAGCCAGTCAGTGTAGCGCACGTGC 297483 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||| | ||||||||||||||||||||||| ||||||| Sbjct 297482 AGCCCTGGACATCTAAGGGCATCACAGACCTATTATTGC 297444 >seq1657 Length=238541 Score = 96.9 bits (106), Expect = 5e-18 Identities = 168/238 (71%), Gaps = 20/238 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || | || ||||| ||||| | | |||||| |||||| | Sbjct 165975 GTACAAAGGGCAGGGACTTAAT----GCAAGCTT-ATGACCCACACTTACTGGGAATTGC 165921 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 | || | | || ||||||||| | || |||||||| |||| ||||| | Sbjct 165920 TTA-TTCATGGGGAATAATTGCAATCTCCCATTCCCATCAC----AAATGGGGTTCAACG 165866 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 |||||| ||||| | || ||| | || || ||| ||||||| | | | Sbjct 165865 GGTTACCCTCACCTGCCAGCATAGGGTAGGCACACGCTGAGC----CAGTGTAACACACA 165810 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| | || | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 165809 TGCAGTCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 165753 >seq252 Length=181907262 Score = 93.3 bits (102), Expect = 6e-17 Identities = 154/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 |||||| || |||| || ||||| ||||| || ||||||||||||| ||||| | | | Sbjct 175781162 CAGGGATTTAATCAATGCAAGCTT-ATGACCTGCACTTACTAGGAATT-CCTCGGTCATG 175781219 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATTACCCGGACCT 129 || ||||||||| | ||||||||||||| | ||||| || ||||| | ||| Sbjct 175781220 GGGAATAATTGCAATCCCCAATCCCCATCACGAATAGGGTTCAAGAGTTTACCAGCGCCT 175781279 Query 130 GTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACA 189 | || ||| || || | ||| | |||||| || ||||| |||| | | Sbjct 175781280 GCTGGTGTAGGGGAGGCACACACTGAGCCAGTTGGTGTAGTGCACGTGCAGCCCCAGATA 175781339 Query 190 TCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 | || | || ||||||||||||||||||| ||| ||| Sbjct 175781340 TATATGAGCGTCACAGACCTGTTATTGCC-CAATCTT 175781375 >seq1113 Length=91965084 Score = 78.8 bits (86), Expect = 1e-12 Identities = 62/73 (85%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 ||||||||| || | ||| |||| | |||||||||||||||||||||||||||||| ||| Sbjct 74692977 TCAGTGTAGTGCACATGCAGCCCTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 74693035 Query 221 AAACTTCCGTGGC 233 || || ||||| Sbjct 74693036 AATCTCAGGTGGC 74693048 >seq41800 Length=1327 Score = 77.0 bits (84), Expect = 5e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217 |||||||||| | ||||| | || | ||||||||||||||||||||||||||||||| Sbjct 37 TCAGTGTAGCACACGTGCAGACCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 93 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751676189035