Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pan_20troglodytes_20[refseq_20GCF_5F000001515.7_202016-05-03] 44,449 sequences; 3,231,170,666 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq106 87.8 7e-12 >seq106 Length=111504155 Score = 87.8 bits (96), Expect = 7e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 349094 CTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGG 349153 || || ||||||||||| |||||| | | | ||| |||||||||||||| | |||| Sbjct 87756567 CTTGGAATGCCCAGGGTGACGTTCATCTCGCCTCTGCCTGCAAAGTGGAAGGTGTTGAGG 87756626 Query 349154 GTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCG 349213 |||| ||| ||| |||||| ||||||| |||| | || || | ||| || |||||| Sbjct 87756627 GTCATCTGGGTGGAGGGCTCTCCGATGCTCTGGGCAGCCAGCAGGCCCACAGCCTCGCCC 87756686 Query 349214 GGC 349216 ||| Sbjct 87756687 GGC 87756689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2083522977483302