Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq29039 123 4e-26 seq7918 114 2e-23 seq57721 111 2e-22 seq8175 109 8e-22 seq43713 107 3e-21 seq57358 104 4e-20 seq51742 104 4e-20 seq53092 102 1e-19 seq51255 102 1e-19 seq53912 98.7 1e-18 seq20526 87.8 3e-15 seq17816 87.8 3e-15 >seq29039 Length=137941 Score = 123 bits (136), Expect = 4e-26 Identities = 190/260 (73%), Gaps = 17/260 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | |||| ||| | ||||| | | |||||| |||||| | Sbjct 35547 GTACAAAGGGCAGGGACTTC----ACGCAAGCCT-ATGACCCTCACTTACTGGGAATT-C 35494 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 || ||| | | || ||||||||| | ||||||||||| | | ||||| || || Sbjct 35493 CTTGTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACCAATGAGGTTCAACAGGTT 35434 Query 120 ACCCGGACCTGTCGGCCA-AGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCGCGT 176 ||||| ||| |||| | || ||| | | | ||| |||||||||| ||| | Sbjct 35433 ACCCGC----GTCTGCCACATATGGTAGTCACATGCTGAGCCAGTCAGTGTAGCACGCAT 35378 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 | |||||| |||||||||||||||||||||||||||||| ||||| || |||| || Sbjct 35377 GTAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGG-CTG 35320 Query 237 AAAGGC-CATCTCCCTCGAA 255 || | | | |||||||| || Sbjct 35319 AATGCCACTTCTCCCTCTAA 35300 Score = 93.3 bits (102), Expect = 6e-17 Identities = 184/260 (71%), Gaps = 18/260 (7%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||| ||| ||| ||||| ||||| | ||| | |||| || Sbjct 33394 GTACAAAGGGCAGGGAA----TCA-CGCAAGCTT-ATGACCTTCAGTTATTGGGAACTTT 33341 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 | ||| | | || ||||| ||| | ||||||||||| | | ||||| || || Sbjct 33340 CA-GTTCATGGGGAATAATTGTAATCCCCGATCCCCATCACCAATGAGGTTCAACAGGTT 33282 Query 120 ACCCGGACCTGTCGGCCA-AGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCGCGT 176 ||||| ||| |||| | | ||| | | | ||| |||||||||| ||| | Sbjct 33281 ACCCGC----GTCTGCCACATACGGTAGGCACATGCTGAGCCAGTCAGTGTAGCACGCAT 33226 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTA 236 | |||||| |||||||||||||||||||||||||||||| ||||| || |||| || Sbjct 33225 GTAGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGG-CTG 33168 Query 237 AAAGGC-CATCTCCCTCGAA 255 || | | | |||||||| || Sbjct 33167 AATGCCACTTCTCCCTCTAA 33148 >seq7918 Length=135000294 Score = 114 bits (126), Expect = 2e-23 Identities = 165/226 (73%), Gaps = 9/226 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||| |||| | |||| ||| | ||||| | | |||||| |||||| | Sbjct 3047773 GTACAAAGGGCATGGACTTC----ACGCAAGCCT-ATGACCCCCACTTACTGGGAATT-C 3047720 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 ||| || | | || ||||||||| | ||||||||||| | || ||| | || || Sbjct 3047719 CTCATTCATGGGGAATAATTGCAATCCCCAATCCCCATCACCAATGGGATTGAACAGGTT 3047660 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| | ||| | | ||| | || | ||| ||| |||||| ||||||| Sbjct 3047659 ACCCGCATCTGCCACGTAGGGT-AGGCACAGGCTGAGCCAGTCATTGTAGCACGCGTGCA 3047601 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 |||| | |||||||||||||||||||||||||||||| ||||| || Sbjct 3047600 GCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCT 3047556 >seq57721 Length=27209 Score = 111 bits (122), Expect = 2e-22 Identities = 169/234 (72%), Gaps = 9/234 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | | || ||| || |||| ||| |||||| |||||| | Sbjct 1804 GTACAAAGGGCAGGGACTTCAT----GCAAGCCTG-TGACCCGCACTTACTGGGAATT-C 1751 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 || || | | || ||||||||| | ||| ||||||| | ||||| || || Sbjct 1750 ATCATTCATGGGGAATAATTGCAATCCCCGATCACCATCACCAATGGGGTTCAACAGGTT 1691 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| | ||| | | ||| | || || ||| ||||||||||| || ||| Sbjct 1690 ACCCGCATCTGCCACATAGGGT-AGGCACACGCTGAGCCAGTCAGTGTAGCGTGCATGCA 1632 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || | | |||||||||||||||||||||||||||||| ||||| ||| ||||| Sbjct 1631 GCACTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTTGGGTGGC 1579 Score = 98.7 bits (108), Expect = 1e-18 Identities = 168/236 (71%), Gaps = 11/236 (5%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | | || ||| | ||||| ||| |||||| |||||| | Sbjct 3448 GTACAAAGGGCAGGGACTTCAT----GCAAGCCT-ATGACCCGCACTTACTGGGAATT-C 3395 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAA--GAT 118 || || | | || ||||||||| | ||| ||||||| | ||||| | | Sbjct 3394 ATCATTCATGGGGAATAATTGCAATCCCCGATCACCATCACCAATGGGGTTCAACAGGGT 3335 Query 119 TACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 |||||| | ||| | | ||| | || || ||| ||||||||||| || ||| Sbjct 3334 TACCCGCATCTGCCACATAGGGT-AGGCACACGCTGAGCCAGTCAGTGTAGCGTGCATGC 3276 Query 179 GGCCCAGAACATCTAA-GGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || | | |||||||| |||||||||||||||||||||| ||||| ||| ||||| Sbjct 3275 AGCACTGGACATCTAAAGGGCATCACAGACCTGTTATTG-CTCAATCTTGGGTGGC 3221 >seq8175 Length=11768 Score = 109 bits (120), Expect = 8e-22 Identities = 171/238 (72%), Gaps = 20/238 (8%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| ||||| ||||| | | |||||| |||||| | Sbjct 9242 GTACAAAGGGCAGGGACTTA----ACGCAAGCTT-ATGACCCACACTTACTGGGAATTGC 9296 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116 || || | | || ||||||||| | ||||||||||| |||| ||||| | Sbjct 9297 -TCATTCATGGGGAATAATTGCAATCCCCCATCCCCATCAC----AAATGGGGTTCAAGG 9351 Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCG 175 ||||||| ||| | | || ||| | || | ||| ||||||| || || Sbjct 9352 GGTTACCCGTACCCGCCAGCATAGGCTAGGCACACACTGAGC----CAGTGTAATGCACG 9407 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 ||| |||| |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 9408 TGCAGCCCCAGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 9464 >seq43713 Length=77800216 Score = 107 bits (118), Expect = 3e-21 Identities = 170/237 (72%), Gaps = 15/237 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | | || ||| | ||||| ||| |||||| |||||| | Sbjct 30328345 GTACAAAGGGCAGGGACTTCAT----GCAAGCCT-ATGACCCGCACTTACTGGGAATT-C 30328292 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||||| | | || ||||||||| | ||| ||||||| | ||||| || || Sbjct 30328291 ATCGTTCATGGGGAATAATTGCAATCCCCGATCACCATCACCAATGGGGTTCAACAGGTT 30328232 Query 120 ACCCGGACCTGTCGGCCA---AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||||| ||| |||| ||| | || || ||| ||| ||||||| || | Sbjct 30328231 ACCCGC----GTCTGCCACATAGGGTAGGCACACGCTGAGCCAGTCAATGTAGCGTGCAT 30328176 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || || | | |||||||||||||||||||||||||||||| ||||| ||| ||||| Sbjct 30328175 GCAGCACTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTTGGGTGGC 30328120 >seq57358 Length=53825 Score = 104 bits (114), Expect = 4e-20 Identities = 168/235 (71%), Gaps = 15/235 (6%) Strand=Plus/Minus Query 3 ACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCT 62 ||||||||||||||| | | || ||| | ||||| ||| | |||| |||||| ||| Sbjct 11756 ACAAAGGGCAGGGACTTCAT----GCAAGCCT-ATGACCCGCACCTACTGGGAATT-CCT 11703 Query 63 CGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATTAC 121 |||| | | || ||||||||| | ||| ||||||| | ||||| || |||| Sbjct 11702 CGTTCATGGGGAAAAATTGCAATCCCCGATCACCATCACCAATGGGGTTCAACAGGTTAC 11643 Query 122 CCGGACCTGTCGGCCA---AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGC 178 ||| ||| |||| ||| | || | ||| |||||||||||| | ||| Sbjct 11642 CCGC----GTCTGCCACATAGGGTAGGCACACACTGAGCCAGTCAGTGTAGCGCACATGC 11587 Query 179 GGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 11586 AGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 11533 >seq51742 Length=4617 Score = 104 bits (114), Expect = 4e-20 Identities = 168/230 (73%), Gaps = 19/230 (8%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | |||| ||| | ||||| | | |||||| |||||| | Sbjct 250 GTACAAAGGGCAGGGACTTC----ACGCAAGCCT-ATGACCCTCACTTACTGGGAATTAC 196 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAA-AGAT 118 | ||| | | || ||||||||| | ||||||||||| | ||| ||||| || | Sbjct 195 TT-GTTCATGGGGAATAATTGCAATCCCCGATCCCCATCACCAATGAG--TTCAACAGGT 139 Query 119 TACCCGGACCTGTCGGCCA-AGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCGCG 175 |||||| ||| |||| | | ||| | | | ||| |||||||||| ||| Sbjct 138 TACCCGC----GTCTGCCACATACGGTAGGCACATGCTGAGCCAGTCAGTGTAGCACGCA 83 Query 176 TGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACT 225 || |||||| |||||||||| ||||||||||||||||||| ||||| || Sbjct 82 TGTAGCCCAGGACATCTAAGG-CATCACAGACCTGTTATTG-CTCAATCT 35 >seq53092 Length=393436 Score = 102 bits (112), Expect = 1e-19 Identities = 167/234 (71%), Gaps = 9/234 (4%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | | || || | ||||| ||| |||||| |||||| | Sbjct 106968 GTACAAAGGGCAGGGACTTCAT----GCAAGTCT-ATGACCCGCACTTACTGGGAATT-C 107021 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACG-ATGAAATTTCAAAGATT 119 |||||| | || || |||| |||| | ||| ||||||| ||| || | || || Sbjct 107022 CTCGTTCATGAGGAATAATTACAATTCCCAATCACCATCACCCATGGGGTTCAACAGGTT 107081 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| | ||| | | ||| | || | | | ||||||||||| || ||| Sbjct 107082 ACCCGCATCTGCCACATAGGGTAAGC-ACATGCTTAGCCAGTCAGTGTAGCGTGCATGCA 107140 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||| ||||||||||||||||||||||| ||||| || ||||| Sbjct 107141 GCCCCGGACATCTGAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 107193 >seq51255 Length=10240 Score = 102 bits (112), Expect = 1e-19 Identities = 163/227 (72%), Gaps = 9/227 (4%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | | || ||| | ||||| ||| |||||| |||||| | Sbjct 9806 GTACAAAGGGCAGGGACTTCAT----GCAAGCCT-ATGACCCGCACTTACTGGGAATT-C 9753 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 || || | | || ||||||||| | ||| ||||||| | ||||| || || Sbjct 9752 ATCATTCATGGGGAATAATTGCAATCCCCGATCACCATCACCAATGGGGTTCAACAGGTT 9693 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| | ||| | | ||| | | || ||| ||||||||||| || ||| Sbjct 9692 ACCCGCATCTGCCACATAGGGT-AGGCATACGCTGAGCCAGTCAGTGTAGCGTGCATGCA 9634 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTT 226 || | | |||||||||||||||||||||||||||||| ||||| ||| Sbjct 9633 GCACTGGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTT 9588 >seq53912 Length=14260 Score = 98.7 bits (108), Expect = 1e-18 Identities = 168/237 (71%), Gaps = 15/237 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| | | || ||| | || || ||| |||||| |||||| | Sbjct 14047 GTACAAAGGGCAGGGACTTCAT----GCAAGCCT-ATAACCCGCACTTACTGGGAATT-C 13994 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATT 119 ||| || | | || ||||||||| ||| ||||||| | ||||| ||||| Sbjct 13993 CTCTTTCATGGGGAATAATTGCAATCCCTGATCACCATCACCAATGCGGTTCAACAGATT 13934 Query 120 ACCCGGACCTGTCGGCCA---AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGT 176 ||||| ||| |||| ||| | || || ||| ||||||||||| || | Sbjct 13933 ACCCGC----GTCTGCCACATAGGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGTGCAT 13878 Query 177 GCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 || |||| | ||||||||||| ||||||||| |||||||| ||||| || ||||| Sbjct 13877 GCAGCCCCGGACATCTAAGGGTATCACAGACATGTTATTG-CTCAATCTCGGGTGGC 13822 >seq20526 Length=2047 Score = 87.8 bits (96), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 7/212 (3%) Strand=Plus/Minus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 |||||| || |||| || ||||| ||||| | | ||||||||||||| ||||| | | | Sbjct 2001 CAGGGATTTAATCAATGCAAGCTT-ATGACCCACTCTTACTAGGAATT-CCTCGGTCATG 1944 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATTACCCGGACCT 129 || ||||||||| | ||||||||| || ||||| || |||| | |||| Sbjct 1943 GGGAATAATTGCAATCCCCAGTCCCCATCATGAATGGGGTTCAAGAGTTTACTAGCACCT 1884 Query 130 GTCGGCCAAGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA 187 | |||| ||| ||| | | | ||| | |||||| || |||| |||| | Sbjct 1883 GCCGGCGTAGGG--TAGGCACATACTGAGCCAGTTGGTGTAGTGCATGTGCAGCCCCAGA 1826 Query 188 CATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||| | ||||||||||||||||||||||| Sbjct 1825 TATCTATGAGCATCACAGACCTGTTATTGCCT 1794 >seq17816 Length=183952662 Score = 87.8 bits (96), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 7/212 (3%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 |||||| || |||| || ||||| ||||| | | ||||||||||||| ||||| | | | Sbjct 177893671 CAGGGATTTAATCAATGCAAGCTT-ATGACCCACTCTTACTAGGAATT-CCTCGGTCATG 177893728 Query 71 ACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAA-AGATTACCCGGACCT 129 || ||||||||| | ||||||||| || ||||| || |||| | |||| Sbjct 177893729 GGGAATAATTGCAATCCCCAGTCCCCATCATGAATGGGGTTCAAGAGTTTACTAGCACCT 177893788 Query 130 GTCGGCCAAGGTGATAGACTCGT--TGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAA 187 | |||| ||| ||| | | | ||| | |||||| || |||| |||| | Sbjct 177893789 GCCGGCGTAGGG--TAGGCACATACTGAGCCAGTTGGTGTAGTGCATGTGCAGCCCCAGA 177893846 Query 188 CATCTAAGGGCATCACAGACCTGTTATTGCCT 219 ||||| | ||||||||||||||||||||||| Sbjct 177893847 TATCTATGAGCATCACAGACCTGTTATTGCCT 177893878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751551717525