Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pongo_20abelii_20[refseq_20GCF_5F000001545.4_202010-03-08] 61,535 sequences; 3,441,244,233 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq8299 75.2 2e-11 seq8175 75.2 2e-11 seq45237 73.4 6e-11 >seq8299 Length=20522 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct 4335 GAAGCTACCGTCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCC 4287 >seq8175 Length=11768 Score = 75.2 bits (82), Expect = 2e-11 Identities = 46/49 (94%), Gaps = 0/49 (0%) Strand=Plus/Minus Query 66 GAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 ||||||||| |||| ||||||||| |||||||||||||||||||||||| Sbjct 2957 GAAGCTACCGTCTGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCC 2909 >seq45237 Length=73212453 Score = 73.4 bits (80), Expect = 6e-11 Identities = 46/50 (92%), Gaps = 0/50 (0%) Strand=Plus/Minus Query 64 GCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113 |||||||||||||||| |||||||| |||||||||| |||||||||||| Sbjct 67244251 GCGAAGCTACCATCTGTGGGATTATGACTGAACGCCTTTAAGTCAGAATC 67244202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 818711658240