Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq16540 96.9 1e-17 seq1 96.9 1e-17 seq16196 87.8 7e-15 >seq16540 Length=8413776 Score = 96.9 bits (106), Expect = 1e-17 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||| |||||||| |||||||||||| || |||| |||||||||||||||| Sbjct 6104388 TGTTAGGACCCAAAAGATGGCGAACTATGCCTGGGCAGAGTGACGCCAGAGGAAACTCTG 6104447 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674 ||||||| | || ||| | || |||||||| || | ||||||||| Sbjct 6104448 GTGGAGGTCTGTAGTGGTCCCGGTGTGCAAATTTGTCACCTGATTTGGGTA 6104498 Score = 95.1 bits (104), Expect = 5e-17 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623 |||| |||||| |||||||| |||||||||||| || |||| |||||||||||||||| Sbjct 6112224 TGTTAGGACCCAAAAGATGGCGAACTATGCCTGGGCAGAGTGACGCCAGAGGAAACTCTG 6112283 Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655 ||||||| | || ||| | || |||||||| Sbjct 6112284 GTGGAGGTCTGTAGTGGTCCCGGTGTGCAAAT 6112315 >seq1 Length=29265399 Score = 96.9 bits (106), Expect = 1e-17 Identities = 98/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615 |||| | |||| |||| | |||||||||||||||| |||| |||| |||||||||| Sbjct 13474695 AGCACACGTGTTAGGACTCAAAAGATGGTGAACTATCCCTGGGCAGGGCTAAGCCAGAGG 13474636 Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675 |||||||||||||| | ||| || ||| ||||||||| || | || |||||| Sbjct 13474635 AAACTCTGGTGGAGTTCCATAGCAGTCCTGATGTGCAAATCAGTCACCTGATCTGGGTAC 13474576 Query 676 AGGGGCGA 683 ||||| || Sbjct 13474575 AGGGGTGA 13474568 >seq16196 Length=911703 Score = 87.8 bits (96), Expect = 7e-15 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | |||| || |||| ||||| ||||||||| | ||| |||||| | ||||| Sbjct 490253 GAGCACGAGCGCAGGTGTTAGGACCGGAAAGATGGAGTGCTAGGCCTGAGCTGTCTGAAG 490194 Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668 ||| || | ||||||||| ||| || ||| | || ||||||||||||| | || Sbjct 490193 CCAAAGAAGACTCTGGTGTAGGGCCGTAGCAATCCTAAAGTGCAAATCGATCCGCCAACC 490134 Query 669 TGGGTATAGGGGC 681 ||||||||||||| Sbjct 490133 TGGGTATAGGGGC 490121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079516538450