Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23]
22,539 sequences; 2,798,152,141 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq16540 96.9 1e-17
seq1 96.9 1e-17
seq16196 87.8 7e-15
>seq16540
Length=8413776
Score = 96.9 bits (106), Expect = 1e-17
Identities = 88/111 (79%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| |||||||| |||||||||||| || |||| ||||||||||||||||
Sbjct 6104388 TGTTAGGACCCAAAAGATGGCGAACTATGCCTGGGCAGAGTGACGCCAGAGGAAACTCTG 6104447
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTA 674
||||||| | || ||| | || |||||||| || | |||||||||
Sbjct 6104448 GTGGAGGTCTGTAGTGGTCCCGGTGTGCAAATTTGTCACCTGATTTGGGTA 6104498
Score = 95.1 bits (104), Expect = 5e-17
Identities = 76/92 (83%), Gaps = 0/92 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||| |||||||| |||||||||||| || |||| ||||||||||||||||
Sbjct 6112224 TGTTAGGACCCAAAAGATGGCGAACTATGCCTGGGCAGAGTGACGCCAGAGGAAACTCTG 6112283
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAAT 655
||||||| | || ||| | || ||||||||
Sbjct 6112284 GTGGAGGTCTGTAGTGGTCCCGGTGTGCAAAT 6112315
>seq1
Length=29265399
Score = 96.9 bits (106), Expect = 1e-17
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||| | |||| |||| | |||||||||||||||| |||| |||| ||||||||||
Sbjct 13474695 AGCACACGTGTTAGGACTCAAAAGATGGTGAACTATCCCTGGGCAGGGCTAAGCCAGAGG 13474636
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
|||||||||||||| | ||| || ||| ||||||||| || | || ||||||
Sbjct 13474635 AAACTCTGGTGGAGTTCCATAGCAGTCCTGATGTGCAAATCAGTCACCTGATCTGGGTAC 13474576
Query 676 AGGGGCGA 683
||||| ||
Sbjct 13474575 AGGGGTGA 13474568
>seq16196
Length=911703
Score = 87.8 bits (96), Expect = 7e-15
Identities = 99/133 (74%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | |||| || |||| ||||| ||||||||| | ||| |||||| | |||||
Sbjct 490253 GAGCACGAGCGCAGGTGTTAGGACCGGAAAGATGGAGTGCTAGGCCTGAGCTGTCTGAAG 490194
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||| || | ||||||||| ||| || ||| | || ||||||||||||| | ||
Sbjct 490193 CCAAAGAAGACTCTGGTGTAGGGCCGTAGCAATCCTAAAGTGCAAATCGATCCGCCAACC 490134
Query 669 TGGGTATAGGGGC 681
|||||||||||||
Sbjct 490133 TGGGTATAGGGGC 490121
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079516538450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |