Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq18563 145 1e-32 seq15651 122 1e-25 seq14041 84.2 3e-14 >seq18563 Length=619886 Score = 145 bits (160), Expect = 1e-32 Identities = 92/100 (92%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||| |||| ||||| ||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 198730 GTCTTGTTCATTATCAGAATTAACCAGACAAATCAGTCCACCAACTAAGAACGCCCATGT 198671 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||||||||||||||||||||||||||| Sbjct 198670 ACCACCACCCACGGAATCAAGAAAGAGCTATCAATCTGTC 198631 >seq15651 Length=9404055 Score = 122 bits (134), Expect = 1e-25 Identities = 87/100 (87%), Gaps = 4/100 (4%) Strand=Plus/Minus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||| |||||| || |||||||||||||| |||||||||| |||||||||||| Sbjct 9040101 GTCTCGTTTGTTATCAGAGTTAACCAGACAAATAACTCCACCAA----GAACGGCCATGC 9040046 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||||||||| ||| | ||||||||| ||||||||||| Sbjct 9040045 ATCACCACCCATGGAACCCAGAAAGAGCGATCAATCTGTC 9040006 >seq14041 Length=6761596 Score = 84.2 bits (92), Expect = 3e-14 Identities = 142/200 (71%), Gaps = 18/200 (9%) Strand=Plus/Minus Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72 |||| |||||||| || || | || | ||||||||||||||||||||| ||||||| Sbjct 4408277 CCGTTAGTGTAGCATGCATGTAGTCCTGGACATCTAAGGGCATCACAGACAAGTTATTG- 4408219 Query 73 CTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAA-------GCCAGCCACC- 124 ||||| | || | |||||| | ||| | ||||||||||| | | || ||||| Sbjct 4408218 CTCAATC-TCGAGTGGCTGAATGCCCCTTGTCCCTCTAAGCAGTTGGGGGACACCCACCG 4408160 Query 125 AACCATAG----TCGATGG--GGCTATTTA--GCAGGTTAAGGTCTCGTTCGTTATCGGA 176 |||| | || |||| | || || ||| |||| |||| ||| | | | || Sbjct 4408159 CTCCATGGTAGCTCCATGGTAGCGTAACTAGTGCACGTTAGAGTCTTGTTAGATGTTGGG 4408100 Query 177 ATTAACCAGACAAATCACTC 196 |||||||||||||||| ||| Sbjct 4408099 ATTAACCAGACAAATCCCTC 4408080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796626021459