Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23]
22,539 sequences; 2,798,152,141 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq19685 322 8e-86
seq15374 291 1e-76
seq5891 113 8e-23
seq16085 87.8 3e-15
seq3002 87.8 3e-15
seq18762 84.2 4e-14
seq5669 82.4 1e-13
>seq19685
Length=598646
Score = 322 bits (356), Expect = 8e-86
Identities = 213/235 (91%), Gaps = 1/235 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | |||| |||||||||||||||||||||||||||||
Sbjct 381417 TACTGAGCAGGATTACCATGGCAACGACACCTCATCAGTAGGGTAAAACTAACCTGTCTC 381476
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 381477 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 381536
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 381537 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGTGACGTCGCTA 381596
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234
|||||||||||| |||||||||||||||||||||||||||||| |||| ||||||
Sbjct 381597 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTCTCTGACACCTC 381651
>seq15374
Length=4994092
Score = 291 bits (322), Expect = 1e-76
Identities = 215/251 (86%), Gaps = 0/251 (0%)
Strand=Plus/Minus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3619091 GTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 3619032
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||
Sbjct 3619031 ACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGATATCGAAGGAT 3618972
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
||||||| ||||| |||||||| |||||| ||||||||||||||||||| |||| ||||
Sbjct 3618971 CAAAAAGTGACGTCACTATGAACACTTGGCCGCCACAAGCCAGTTATCCCCGTGGCAACT 3618912
Query 222 TTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCA 281
|||||| |||||| || | ||| | || | |||||||| ||||| ||||||
Sbjct 3618911 TTTCTGACACCTCCTGCTTAAAACCCAAAAGGTCAGAAGGATCGGGAGGCCCTGCTTTCA 3618852
Query 282 TGGTTTGTATT 292
||| ||||||
Sbjct 3618851 CGGTCTGTATT 3618841
>seq5891
Length=7406230
Score = 113 bits (124), Expect = 8e-23
Identities = 77/87 (89%), Gaps = 0/87 (0%)
Strand=Plus/Minus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||| | | |||||||||| |||||||||||||||||||| ||||||||
Sbjct 7237199 GAATTCTGCTTCACAACGGTAGGAAGAGCTGACATCGAAGGATCAAAAAGTGACGTCGCT 7237140
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGT 205
|||||| |||||| |||||||||||||
Sbjct 7237139 ATGAACTCTTGGCCGCCACAAGCCAGT 7237113
>seq16085
Length=2194486
Score = 87.8 bits (96), Expect = 3e-15
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Minus
Query 161 TCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAAC 220
||||||||||| || ||||||||| |||||| ||||||||||||||| |||||||| ||
Sbjct 384696 TCAAAAAGCAATGTTGCTATGAACACTTGGCCACCACAAGCCAGTTATTCCTGTGGTGAC 384637
Query 221 TTTTCT 226
||||||
Sbjct 384636 TTTTCT 384631
>seq3002
Length=7783076
Score = 87.8 bits (96), Expect = 3e-15
Identities = 56/61 (92%), Gaps = 0/61 (0%)
Strand=Plus/Minus
Query 51 ACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAA 110
|||||||||| |||||||||| |||||||||| |||||||||||| | ||||||||||||
Sbjct 3144204 ACCTGTCTCACGACGGTCTAATCCCAGCTCACATTCCCTATTAGTAGATGAACAATCCAA 3144145
Query 111 C 111
|
Sbjct 3144144 C 3144144
>seq18762
Length=10838250
Score = 84.2 bits (92), Expect = 4e-14
Identities = 84/108 (78%), Gaps = 1/108 (1%)
Strand=Plus/Minus
Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156
|||||||||||||| || | | |||| |||| | ||| ||||||||| |||| ||
Sbjct 7376965 GGTGAACAATCCAAGGCCTGGGGGATTC-GCTTTGCAGGGATGGGAAGAGCCAACATTGA 7376907
Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAG 204
||||||| | ||| | || | |||||| |||||||| ||||||||||
Sbjct 7376906 AGGATCACAGGGCAGCATCACCATGAACCCTTGGCTGTCACAAGCCAG 7376859
>seq5669
Length=2999205
Score = 82.4 bits (90), Expect = 1e-13
Identities = 140/202 (69%), Gaps = 6/202 (3%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||| ||||| ||||||||| ||||| ||| | | |||| |||||||||| ||| ||
Sbjct 671092 TCATTAGTAGAGTAAAACTATCCTGTATCACAATTGCCTAATCCCAGCTCACATTCT-TA 671034
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||| ||||| ||||||||| ||| || |||| ||| |||| ||||| |
Sbjct 671033 TTATTGGGTTCACAATCCAATACTTGGTAAAGTCTGTTTCACAATGA-----AGAGCTAA 670979
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|||| |||| ||| ||| | ||| |||| |||| | ||||| |||
Sbjct 670978 CATCTGAGGACCAAGAAGTGGAATTGCTGTGAAACTTTGGTCACTGTGCTCCAGTGATCT 670919
Query 211 CTGTGGTAACTTTTCTGGCACC 232
|||||||||||| ||| ||||
Sbjct 670918 CTGTGGTAACTTGCCTGACACC 670897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854207426784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |