Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23]
22,539 sequences; 2,798,152,141 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2224 138 3e-30
seq18096 93.3 1e-16
seq20873 89.7 2e-15
>seq2224
Length=17281721
Score = 138 bits (152), Expect = 3e-30
Identities = 125/152 (82%), Gaps = 9/152 (6%)
Strand=Plus/Plus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTA----AGGTACT-ATCAA 397
|||||||||| |||||||||||||||| |||||||| ||| | || | | |||||
Sbjct 9668531 AGCATGTATTTGCTCTAGAATTACCACAGTTATCCAAGTAAGAGAGGAGCGAGTGATCAA 9668590
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGAT-TGCTTATAC 455
| | | |||||||||||||||||||||| |||||||||| ||| || | ||| |||
Sbjct 9668591 ACGAGCCATAACTGATTTAATGAGCCATTTGCAGTTTCACCGTACCAGCTGTGCGTAT-- 9668648
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAG 487
||||||||||||||||||||| ||||||||||
Sbjct 9668649 TTAGACATGCATGGCTTAATCCTTGAGACAAG 9668680
Score = 91.5 bits (100), Expect = 4e-16
Identities = 115/152 (76%), Gaps = 11/152 (7%)
Strand=Plus/Plus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTAT----CAAA 398
|||||||||||| ||||||| ||||| |||| ||| | || ||| | | ||||
Sbjct 8324029 AGCATGTATTAGTTCTAGAAGCACCACAGTTACCCAAG-AG--AGGAGCCAGTGGCCAAA 8324085
Query 399 TAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGT-ATAG-ATTGCTTATACT 456
||| |||||||||||||||||||||| |||||||||||| || ||| | |||
Sbjct 8324086 GGAACCATAACTGATTTAATGAGCCATTTACAGTTTCACTGTGCCAGCCGTGC--ACACT 8324143
Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGC 488
|| ||||||| ||||| ||| | ||||||||
Sbjct 8324144 TACACATGCACAGCTTAGTCTCTCAGACAAGC 8324175
>seq18096
Length=5987638
Score = 93.3 bits (102), Expect = 1e-16
Identities = 132/181 (73%), Gaps = 6/181 (3%)
Strand=Plus/Minus
Query 51 GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGT 110
|||||| |||||||| |||| || || ||| |||||||||||||||||||| || |
Sbjct 2382615 GTCACTGCCTCCCCGCGTCGTGAGCAGGGAATCGGCGCGCCTGCTGCCTTCCTTCCATAT 2382556
Query 111 GGTAGCCGTTTCTCAGGCTCCC--TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTT 168
|| || | ||||| |||||||| |||||| |||| || | | | ||| | | || |
Sbjct 2382555 GGGAGGCATTTCTAAGGCTCCCTCTCTCCGCAATCCAAAACCGAATGCCCATCAACCATG 2382496
Query 169 GATACCATGGTAGGC-CACTATCCTACCATCGAAAGTTGAT--AGGGCAGAAATTTGAAT 225
| ||| |||||||| || | ||| || | |||||| | |||||||| ||| |||
Sbjct 2382495 GTCACCGTGGTAGGCACAGT-GACTATCACCAGAAGTTGGTTAAGGGCAGACATTCAAAT 2382437
Query 226 G 226
|
Sbjct 2382436 G 2382436
>seq20873
Length=9479699
Score = 89.7 bits (98), Expect = 2e-15
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 26 AAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTG 85
|||||| ||||||| ||||| | ||| |||||||||| || ||| ||||||||||
Sbjct 7795928 AAAGAGTCCTGTATTGTTATTTTTCATCATTACCTCCCCGGGTAGGGGGCGGGTAATTTG 7795869
Query 86 CGCGCCTGCTGCCTTCCTTGGA 107
||||||||||||||||||||||
Sbjct 7795868 CGCGCCTGCTGCCTTCCTTGGA 7795847
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510059570944
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |