Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Propithecus_20coquereli_20[refseq_20GCF_5F000956105.1_202015-03-23] 22,539 sequences; 2,798,152,141 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14041 107 2e-18 seq11110 104 2e-17 >seq14041 Length=6761596 Score = 107 bits (118), Expect = 2e-18 Identities = 110/144 (76%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 |||||| || || ||||| |||||||| || ||||| ||||| |||| ||||| || Sbjct 1428908 GGTATATTCCACTATTTCTGTGCACAGGTTGCTGCATTTGATGGTTCCCAGGTTCTGCTG 1428967 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| ||||| || | ||| ||||| | |||||| || || || ||||| || Sbjct 1428968 GTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTATGGGGTTCCTGTCTCTGTCTG 1429027 Query 66169 GGACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | |||||| Sbjct 1429028 AGACTCAATGATGGCATACCAAAG 1429051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || ||||| || ||||| ||||| |||| ||||| | || || || || || | Sbjct 1430294 CATGAAGAGATCCGGAATCCAAAGGGCAAAGAAAAGATCCCTGGCACGCTGTTCTTCCTT 1430353 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || || || ||||||||||||||||| | |||||| |||||||||| Sbjct 1430354 TCCTGTG-TTCTTCTTTAAATCAAGGAACTCAAAGATGTCTGAATGCCAAGGTTCCAGGT 1430412 Query 66459 AGATGGCGAA 66468 |||| || || Sbjct 1430413 AGATAGCAAA 1430422 >seq11110 Length=21012544 Score = 104 bits (114), Expect = 2e-17 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 61270 CAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAAT 61329 ||||||||||| || | ||||| ||||||||||| ||||| || ||| ||| |||||| Sbjct 1786386 CAGGAGGTGCAGGTTCCAGAGGCTCGTTGTTTCTATGGCTTTCAAATTCTCATCGAGAAT 1786445 Query 61330 GTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGA 61376 || ||||| |||||||||||| | || || || || |||||||| || Sbjct 1786446 GTTCACTCAGAGATGTACAGTTTGCTAATAGACACTTACATCAGAGA 1786492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397458790430960