Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4693 105 3e-21 seq17428 104 1e-20 seq10774 100 1e-19 seq14324 78.8 4e-13 >seq4693 Length=1799408 Score = 105 bits (116), Expect = 3e-21 Identities = 67/73 (92%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 1189093 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGCAAGTGAACAGGTAAGAGCCCAGCA 1189152 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 1189153 CCAAATCCCTGCC 1189165 >seq17428 Length=1960752 Score = 104 bits (114), Expect = 1e-20 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || | ||||||||||||||||||| | Sbjct 74940 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAATTGAACAGGGAAGAGCCCAGTG 74881 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||||| |||||| | |||| ||| ||| || Sbjct 74880 TTGAATCCCTGCCCCGCAGTGGGGTGTGGGAAATGGGGCATA 74839 >seq10774 Length=296526 Score = 100 bits (110), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||| || ||||||||| | |||||||| | Sbjct 186654 GGAAAAGAAACTAACCAGGATTCCCTTAGTAAAGGTGAGTGAACA---AGGAGCCCAGTG 186710 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101 || ||| || | ||| ||||||| |||||| ||| || || Sbjct 186711 CCAAATGCCTGTCCCTTGGTGGGGTGCGGGAAATGAGGTGT 186751 >seq14324 Length=219519 Score = 78.8 bits (86), Expect = 4e-13 Identities = 76/97 (78%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | ||||||||||||| |||| ||||| || |||||||||| | ||||| ||| Sbjct 179066 AAATGGAACTAACCAGGATGCCCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 179010 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 |||||| ||||| |||||| | |||| ||||||| Sbjct 179009 AAATCCCTGCCCCTTGGTGGGCTGAGGGAAATGTGGC 178973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230173130880