Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03]
105,032 sequences; 2,977,074,946 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq10551 167 4e-39
seq24903 149 1e-33
seq4643 143 4e-32
seq16226 131 3e-28
>seq10551
Length=57650
Score = 167 bits (184), Expect = 4e-39
Identities = 107/117 (91%), Gaps = 0/117 (0%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 29123 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 29064
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 29063 ACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATCTGTC 29007
>seq24903
Length=1203141
Score = 149 bits (164), Expect = 1e-33
Identities = 167/220 (76%), Gaps = 9/220 (4%)
Strand=Plus/Plus
Query 46 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCC 105
||| | |||||||||| ||||||||| |||| || |||| ||| ||| | ||||
Sbjct 177835 CTATGAGCATCACAGATCTGTTATTGT-TCAATCTCGGATTG-CTGAGCACCACTTGTCC 177892
Query 106 CTCTAAGAAGCCAGCCA---CCAAC----CATAGTCGATGGGGCTATTTAGCAGGTTAAG 158
| ||||||||| | || || || | ||| ||| | |||| | | |
Sbjct 177893 CCCTAAGAAGCTGGGGGAGGCCGACTGCTCAGGGATCATGTAACTAGTCAGCATGCCATG 177952
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| ||| ||||| ||||| |||||||||||| ||||||||| |||||| ||||||||
Sbjct 177953 GTCTCATTCCTTATCAGAATTTACCAGACAAATCGCTCCACCAATTAAGAATGGCCATGC 178012
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||| |||||||||| ||||||||||
Sbjct 178013 ACCACCACCCATAGAATCGAGAAAGAGCTGTCAATCTGTC 178052
>seq4643
Length=3609207
Score = 143 bits (158), Expect = 4e-32
Identities = 162/212 (76%), Gaps = 9/212 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||| | ||||| |||| | | |||||||||||||||||||||||||||| ||
Sbjct 2495062 GTCAGTGTAGCACACGTGCAGCCCTGGATATCTAAGGGCATCACAGACCTGTTATTG-CT 2495120
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC-CAT 130
||| | || |||||| | |||| | |||||||||||||| | | | || |
Sbjct 2495121 CAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGAATGCTGACTGCT 2495179
Query 131 AGTCG---ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
|| | ||| ||| |||||| | | ||||| ||| ||||| ||||||| |||||
Sbjct 2495180 TGTGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGAC 2495239
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219
|||| |||||||||||||||||| || |||||
Sbjct 2495240 AAATTACTCCACCAACTAAGAACTGCTATGCA 2495271
>seq16226
Length=3262196
Score = 131 bits (144), Expect = 3e-28
Identities = 100/117 (85%), Gaps = 1/117 (1%)
Strand=Plus/Minus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | || |||| ||| |||||| |||||||||||||||| ||||||||
Sbjct 689391 CTAGTTAGCATTTCAAAGTCTTGTTTGTTATCAAAATTAACCAGACAAATAGCTCCACCA 689332
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||| ||||||||| ||||||||| ||||| |||||||||||||||||| ||
Sbjct 689331 ACTAAGAATGGCCATGCA-CACCACCCACGGAATCGAGAAAGAGCTATCAATCTATC 689276
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795989257992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |