Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq13684 138 3e-30 seq26208 75.2 3e-11 >seq13684 Length=833 Score = 138 bits (152), Expect = 3e-30 Identities = 116/141 (82%), Gaps = 1/141 (1%) Strand=Plus/Minus Query 258 ACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCT 317 ||| || |||||||||||||||| ||||| ||||||||||||||| ||||||||||||| Sbjct 825 ACTCGATCAGTGAGCTATTACGCTTTCTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCT 766 Query 318 GGTTGTCTACGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGA 377 | |||||| || |||| || ||||||||| || || | |||||| ||||||||| Sbjct 765 GACTGTCTATGCCTTCCCACTTCGTTTCCCACTTAGCCA-TAGTTAGGGACCTTAGCTGG 707 Query 378 TGATCTGGGCTGTTTCCCTCT 398 | |||||| ||||||||||| Sbjct 706 CGGTCTGGGTTGTTTCCCTCT 686 >seq26208 Length=452 Score = 75.2 bits (82), Expect = 3e-11 Identities = 94/128 (73%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| | || || ||| | | | | Sbjct 252 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTGCGCCGATGAACGTTGCGCAG 193 Query 64 GAACCCTTGGATAATCGGCGGACGGGATTCCCA-CCCGTCACACGCTACTCATGCCTGCA 122 ||| ||||||| ||||| ||| || || ||| | ||||||||||| | ||| Sbjct 192 GAAACCTTGGACTTACGGCGAGGGGGCTTTTCACCCCCTTTATCGCTACTCATGTCAGCA 133 Query 123 TTCTCACT 130 |||||||| Sbjct 132 TTCTCACT 125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1176363143168