Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20bieti_20[refseq_20GCF_5F001698545.1_202016-08-03] 105,032 sequences; 2,977,074,946 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq20436 143 9e-30 >seq20436 Length=3738 Score = 143 bits (158), Expect = 9e-30 Identities = 204/287 (71%), Gaps = 0/287 (0%) Strand=Plus/Plus Query 24775 AAGGCGCTGGCATGGGTGGAGAAAAACATCAGAGTGCCGCTGACCGAACCCCAGAAAGCG 24834 |||||||| | ||||| || ||| ||| || ||||||||||||| || |||| Sbjct 1584 AAGGCGCTCGACTGGGTAGACCGCAACGTCAAGGTAACGCTGACCGAACCGCAAAAAGTC 1643 Query 24835 GGGATCGCGTCATTCTGTCCGTACAACATTGGCCCCGGTAAGTGTTTCCCGTCGACGTTT 24894 |||||||| || ||||| |||| ||||| |||||||| || || ||| | || || ||| Sbjct 1644 GGGATCGCCTCGTTCTGCCCGTGGAACATCGGCCCCGGAAAATGCTTCACCTCCACCTTT 1703 Query 24895 TACAGACGGATTAATGCAGGAGATCGAAAAGGTGCCTGCGAAGCGATTCGCTGGTGGATT 24954 |||| | | || || || || || | || |||||| || || ||| | ||||| Sbjct 1704 TACAAGAAGCTGAACGCCGGCGACCGTATTGGCGCCTGCCGAGAAATCCGCCGTTGGATA 1763 Query 24955 AAGGACGGTGGCAGGGACTGCCGTATTCGCTCAAATAACTGTTACGGTCAGGTATCCCGT 25014 |||| |||| | || ||||| || || || |||||||| ||||| ||| | || Sbjct 1764 TTCGACGCTGGCCGAGATTGCCGCATCCGTTCGAATAACTGCTACGGGCAGATCGTACGG 1823 Query 25015 CGTGACCAGGAGAGCGCGCTGGCGTGCTGGGGAATCGACAGATAAGC 25061 || || ||||| || ||||| ||||||||| | |||| || ||| Sbjct 1824 CGCGATCAGGAAGCCGAACTGGCTTGCTGGGGATTGGACAAATGAGC 1870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175326649872672