Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 356 5e-96
seq42595 149 1e-33
>seq43180
Length=4985
Score = 356 bits (394), Expect = 5e-96
Identities = 277/326 (85%), Gaps = 3/326 (1%)
Strand=Plus/Plus
Query 13 GGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGT 72
||||||||||||||||||||| || ||| |||||||||||||||| || ||| ||
Sbjct 3550 GGGGGTGAAATAGACCCTGAAACCATACGCTTACAAGCGGTCGGAGCAGATAAGTTCTGT 3609
Query 73 GACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGC 132
|||||||||||||||||||||||||||||||||||| || |||| || |||||||| ||
Sbjct 3610 GACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTCACTGGCAAGGTTAAGTGC 3669
Query 133 TTCAG-GCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGA-CGAGTTGGTGGCGC 190
|| | | ||| ||||| || ||||||||| || ||||||||| | ||| |||| |
Sbjct 3670 TTTAAAGTACGT-AGCCGGAGCGAAAGCGAGTCTGAACAGGGCGTGCTAGTCAGTGGAGG 3728
Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250
||||||||||||||||||||||||||| ||||||||||||| ||||| | |||
Sbjct 3729 TAGACGCGAAACCTTGTGATCTACCCATGAGCAGGTTGAAGGTTGGGTAAAACCAACTGG 3788
Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310
||||||||||| ||||||||||||||||||| |||||||| | |||||||||||||||||
Sbjct 3789 AGGACCGAACCAGTAAACGTTGAAAAGTTTTTGGATGACTTGTGGGTAGGGGTGAAAGGC 3848
Query 311 CAATCAAACTGGGAAATAGCTCGTAC 336
||||||||||||||||||||||||||
Sbjct 3849 CAATCAAACTGGGAAATAGCTCGTAC 3874
>seq42595
Length=2895
Score = 149 bits (164), Expect = 1e-33
Identities = 231/325 (71%), Gaps = 5/325 (2%)
Strand=Plus/Minus
Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70
||||| |||||| ||| |||||| ||| | || |||||| || |||||| | |
Sbjct 2382 AGGGGAGTGAAAGAGATCCTGAAACCGTGTGCTTACAAGTAGTTGGAGCCCCCTTCGGGG 2323
Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130
||||| |||| ||||||| | |||| || ||||| | || ||| ||||||||
Sbjct 2322 GTGACAGCGTACCTTTTGTAGAATGGACCGGCGAGTGACGATTCTA-AGCAAGGTTAAG- 2265
Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC-GAGTTGGTGGCG 189
|| || || ||||| || ||||||||| || || ||||||| ||||| ||
Sbjct 2264 -CTGAAGAGGCGG-AGCCGCAGCGAAAGCGAGTCTGAATAGGGCGAATGAGTTTAGGGTT 2207
Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249
| ||| ||||||| ||||||||||||| | |||| |||||| |||||| | |||
Sbjct 2206 GTCGACCCGAAACCGTGTGATCTACCCATGTCCAGGGTGAAGTTCAGGTAACACTGAATG 2147
Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309
|||| ||||||| | ||| |||| | |||||| | |||||||||||||| |
Sbjct 2146 GAGGCCCGAACCCACGCATGTTAAAAAATGCGGGGATGAGGTGTGGGTAGGGGTGAAATG 2087
Query 310 CCAATCAAACTGGGAAATAGCTCGT 334
|||||| ||| ||| |||||| ||
Sbjct 2086 CCAATCGAACACGGAGATAGCTGGT 2062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 971481739264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |