Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000370.1
Length=180
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 163 3e-38
seq42595 75.2 1e-11
>seq43180
Length=4985
Score = 163 bits (180), Expect = 3e-38
Identities = 143/176 (81%), Gaps = 3/176 (2%)
Strand=Plus/Plus
Query 8 GGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGGG 67
|| |||||||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||
Sbjct 3050 GGGGGATGCCTTGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATAAGCTGCGGG 3109
Query 68 GATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCGATATATTGGAGA 127
|||||||||||||||||| ||||| |||| |||||||||| |||||| | ||| |||
Sbjct 3110 GATTGGCACATACGAATTAATCCGCAGATTTCCGAATGGGACAACCCACTTAGTTGAAGA 3169
Query 128 -TA--TATCATAACGCTAGGCGTTAGGCGAACGTGGGGAACTGAAACATCTAAGTA 180
|| |||| | || | | |||| ||| | |||||||||||||||||||
Sbjct 3170 CTAAGTATCCTGTAGCAATACAGGAGGCAAACCCGCTGAACTGAAACATCTAAGTA 3225
>seq42595
Length=2895
Score = 75.2 bits (82), Expect = 1e-11
Identities = 82/109 (75%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 7 CGGTGGATGCCTAGGCTCTCGGAGGCGAAGAAGGACGTGATAAGCTGCGAAAAGCTACGG 66
|||||||||||| ||| || |||| ||| |||||||| | | | ||| | ||| |||
Sbjct 2895 CGGTGGATGCCTTGGCACTGGGAGCCGATGAAGGACGGAACGAACGCCGATACGCTTCGG 2836
Query 67 GGATTGGCACATACGAATTGATCCGTAGATATCCGAATGGGGCAACCCG 115
||| | | || | |||||||| |||| ||||||||||| ||||||
Sbjct 2835 GGAGCTGTAAGTAAGCTTTGATCCGAAGATTTCCGAATGGGGGAACCCG 2787
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476174070072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |