Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 273 6e-71
>seq43180
Length=4985
Score = 273 bits (302), Expect = 6e-71
Identities = 304/401 (76%), Gaps = 5/401 (1%)
Strand=Plus/Plus
Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1270 GAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTG 1329
Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130
|||| ||| |||| ||||| ||||| |||||| | |||| ||| |||||| ||
Sbjct 1330 TCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGATAATTAAGTCAGTGGTGAAAGCCG 1389
Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190
||| ||| ||| || ||| |||| | || |||||| |||| || |
Sbjct 1390 ACAGCTCAACTGTCGAACCGCCATTGATACTGGTTGTCTTGAGTGTAGTTGAGGCAGGCG 1449
Query 191 GAATTCCACG-TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249
||||| ||| |||||| ||||||||| ||||||| | ||||||| || ||||||||
Sbjct 1450 GAATT-TACGATGTAGCGGTGAAATGCATAGATATCGTAAAGAACACCTATAGCGAAGGC 1508
Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309
||| || | || ||||||||| | |||||||||| |||||||| ||||||||||||
Sbjct 1509 AGCTTGCTAAGCTACTACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAGGATTAGA 1568
Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGAT-TTACTTCCTTG 368
||||||||||||||| ||| |||||||| ||| | |||||| ||| ||||| |
Sbjct 1569 TACCCTGGTAGTCCATGCCGTAAACGATGATTACTCGATGTTGGCGATATTACTGTCAGC 1628
Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409
|| | ||| || |||| |||| || |||||||| |||
Sbjct 1629 GT--CCAAGCGAAAGCGTTAAGTAATCCACCTGGGGAGTAC 1667
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1287852437248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |