Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq43180 273 6e-71 >seq43180 Length=4985 Score = 273 bits (302), Expect = 6e-71 Identities = 304/401 (76%), Gaps = 5/401 (1%) Strand=Plus/Plus Query 11 GAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTA 70 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1270 GAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTG 1329 Query 71 ATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCC 130 |||| ||| |||| ||||| ||||| |||||| | |||| ||| |||||| || Sbjct 1330 TCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGATAATTAAGTCAGTGGTGAAAGCCG 1389 Query 131 CGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTG 190 ||| ||| ||| || ||| |||| | || |||||| |||| || | Sbjct 1390 ACAGCTCAACTGTCGAACCGCCATTGATACTGGTTGTCTTGAGTGTAGTTGAGGCAGGCG 1449 Query 191 GAATTCCACG-TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGC 249 ||||| ||| |||||| ||||||||| ||||||| | ||||||| || |||||||| Sbjct 1450 GAATT-TACGATGTAGCGGTGAAATGCATAGATATCGTAAAGAACACCTATAGCGAAGGC 1508 Query 250 AGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGA 309 ||| || | || ||||||||| | |||||||||| |||||||| |||||||||||| Sbjct 1509 AGCTTGCTAAGCTACTACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAGGATTAGA 1568 Query 310 TACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGAT-TTACTTCCTTG 368 ||||||||||||||| ||| |||||||| ||| | |||||| ||| ||||| | Sbjct 1569 TACCCTGGTAGTCCATGCCGTAAACGATGATTACTCGATGTTGGCGATATTACTGTCAGC 1628 Query 369 GTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 || | ||| || |||| |||| || |||||||| ||| Sbjct 1629 GT--CCAAGCGAAAGCGTTAAGTAATCCACCTGGGGAGTAC 1667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1287852437248