Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000538.1
Length=248
Score E
Sequences producing significant alignments: (Bits) Value
seq42595 188 1e-45
seq43180 141 1e-31
>seq42595
Length=2895
Score = 188 bits (208), Expect = 1e-45
Identities = 187/241 (78%), Gaps = 11/241 (5%)
Strand=Plus/Plus
Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61
||| ||||||| ||||||||||| ||||| || |||||||| ||||| || || |||
Sbjct 1039 TTAACCTTCCAGCACCGGGCAGGTGTCAGCCCCTATACATCACCTTACGGT-TTAGCAGA 1097
Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCAA 121
|||||||||||| |||||||||||||| ||| ||| ||||| | | || | |
Sbjct 1098 AACCTGTGTTTTTGGTAAACAGTCGCTTGGATCTTTTCACTGCGGCT--CTCCGGACCCG 1155
Query 122 CACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAAT 181
| ||| ||| |||||||||||||||||||||||||| |||||||||| |
Sbjct 1156 AAGGTCCTTCGA--------GCACCCCTTCTCCCGAAGTTACGGGGTGATTTTGCCGAGT 1207
Query 182 TCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGTT 241
|||||||| | ||||| ||||| || ||||| ||||||| | || |||||||||||||||
Sbjct 1208 TCCTTAACGAGAGTTCTCCCGAGCGTCTTAGAATTCTCTTCTTGCCCACCTGTGTCGGTT 1267
Query 242 T 242
|
Sbjct 1268 T 1268
>seq43180
Length=4985
Score = 141 bits (156), Expect = 1e-31
Identities = 179/248 (72%), Gaps = 16/248 (6%)
Strand=Plus/Minus
Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60
|||| ||||||| ||||||||||| ||||| || ||||| || ||| | | ||||||
Sbjct 4905 CTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTCGAT-TTCGCAA 4847
Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120
| | ||||||||| ||||||||||| | || ||| ||||| | |
Sbjct 4846 AGCCATGTGTTTTTGCTAAACAGTCGCCTGGGCCTTTTCACTGCGGCTTC---------- 4797
Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180
|| || | | | || ||||||||||||||||||| ||||||||||||| |
Sbjct 4796 -----TCCTTTGACGGAGGAAGCGCCCCTTCTCCCGAAGTTACAGGGCCATTTTGCCTAG 4742
Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240
||||||| ||| |||| ||| | |||||| |||||| || ||| ||||||||||||
Sbjct 4741 TTCCTTAGCCATGAATCACTCGAGCACCTTAGGATTCTCACCCCGACTACCTGTGTCGGT 4682
Query 241 TTACGGTA 248
||||||||
Sbjct 4681 TTACGGTA 4674
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 693488410776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |