Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value seq42595 82.4 7e-14 seq43180 78.8 9e-13 >seq42595 Length=2895 Score = 82.4 bits (90), Expect = 7e-14 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 68 GCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATAGGGTGTGA 127 ||||||||||| |||||||||| ||||| || || ||| || |||||||| ||| Sbjct 1123 GCGACTGTTTACCAAAAACACAGGTTTCTGCTAAACCGTAAGGTGATGTATAGGGGCTGA 1064 Query 128 CGCCTGCCCGGTGCCGGAAGGTTAA 152 | |||||||||||| |||||||||| Sbjct 1063 CACCTGCCCGGTGCTGGAAGGTTAA 1039 >seq43180 Length=4985 Score = 78.8 bits (86), Expect = 9e-13 Identities = 73/93 (78%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| ||||||||||| ||||||||| || ||| || |||||| || ||||| Sbjct 4812 AGGCCCAGGCGACTGTTTAGCAAAAACACATGGCTTTGCGAAATCGAAAGATGAAGTATA 4871 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 || |||| |||||||||||| |||||||||| Sbjct 4872 AGGCCTGACACCTGCCCGGTGCTGGAAGGTTAA 4904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476174070072