Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq117071 179 2e-43
seq38939 109 3e-22
seq20174 107 9e-22
seq29718 100 1e-19
seq98597 98.7 5e-19
seq35371 82.4 4e-14
seq12684 78.8 4e-13
seq5638 71.6 6e-11
>seq117071
Length=586
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 164
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||| ||||||||||
Sbjct 163 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 122
>seq38939
Length=1194457
Score = 109 bits (120), Expect = 3e-22
Identities = 68/73 (93%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1188987 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCAAGTGAACAGGTAAGAGCCCAGCA 1189046
Query 61 CCGAATCCCCGCC 73
|| |||||| |||
Sbjct 1189047 CCAAATCCCTGCC 1189059
>seq20174
Length=622323
Score = 107 bits (118), Expect = 9e-22
Identities = 85/102 (83%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| |
Sbjct 296642 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 296583
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||| ||||||| |||||| | |||| ||| ||| ||
Sbjct 296582 TTGAATCCCTGCCCCGCAGTGGGGTGTGGGAAATGGGGCATA 296541
>seq29718
Length=102163
Score = 100 bits (110), Expect = 1e-19
Identities = 83/101 (82%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||| ||||| || ||||||||| | |||||||| |
Sbjct 54630 GGAAAAGAAACTAACCAGGATTCCCTTAGTAAAGGTGAGTGAACA---AGGAGCCCAGTG 54574
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101
|| ||| || | ||| ||||||| |||||| ||| || ||
Sbjct 54573 CCAAATGCCTGTCCCTTGGTGGGGTGCGGGAAATGAGGTGT 54533
>seq98597
Length=352
Score = 98.7 bits (108), Expect = 5e-19
Identities = 63/69 (91%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||
Sbjct 219 GGAAAAGAAACTAACAAGGATTCCCCCAGTAACGGCGAGTGAAGTGGGAATAGCCCAGCA 278
Query 61 CCGAATCCC 69
|||||||||
Sbjct 279 CCGAATCCC 287
>seq35371
Length=2334
Score = 82.4 bits (90), Expect = 4e-14
Identities = 61/70 (87%), Gaps = 1/70 (1%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGA-AGAGCCCAGC 59
|||||||||||||||||||||| ||| |||| ||||||| ||||||| | | ||||||||
Sbjct 274 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAATATAGCCCAGC 333
Query 60 GCCGAATCCC 69
| |||||||
Sbjct 334 ACTGAATCCC 343
>seq12684
Length=246053
Score = 78.8 bits (86), Expect = 4e-13
Identities = 76/97 (78%), Gaps = 3/97 (3%)
Strand=Plus/Minus
Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62
||| | ||||||||||||| |||| ||||| || |||||||||| | ||||| |||
Sbjct 189684 AAATGGAACTAACCAGGATGCCCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 189628
Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99
|||||| ||||| |||||| | |||| |||||||
Sbjct 189627 AAATCCCTGCCCCTTGGTGGGCTGAGGGAAATGTGGC 189591
>seq5638
Length=219
Score = 71.6 bits (78), Expect = 6e-11
Identities = 51/59 (86%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
||| |||||||| || ||||||||| |||||||||||| |||| ||||| ||||||||
Sbjct 205 GGAGAAGAAACTTACGAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230107294080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |