Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq117071 179 2e-43 seq38939 109 3e-22 seq20174 107 9e-22 seq29718 100 1e-19 seq98597 98.7 5e-19 seq35371 82.4 4e-14 seq12684 78.8 4e-13 seq5638 71.6 6e-11 >seq117071 Length=586 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 223 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 164 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 163 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 122 >seq38939 Length=1194457 Score = 109 bits (120), Expect = 3e-22 Identities = 68/73 (93%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct 1188987 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCAAGTGAACAGGTAAGAGCCCAGCA 1189046 Query 61 CCGAATCCCCGCC 73 || |||||| ||| Sbjct 1189047 CCAAATCCCTGCC 1189059 >seq20174 Length=622323 Score = 107 bits (118), Expect = 9e-22 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||| ||||||||| |||||||| | || ||||||||||||||||||||| | Sbjct 296642 GGAAAAGAAATTAACCAGGACTCCCTCAGCAGTAGCAAGTGAACAGGGAAGAGCCCAGTG 296583 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| ||||||| |||||| | |||| ||| ||| || Sbjct 296582 TTGAATCCCTGCCCCGCAGTGGGGTGTGGGAAATGGGGCATA 296541 >seq29718 Length=102163 Score = 100 bits (110), Expect = 1e-19 Identities = 83/101 (82%), Gaps = 3/101 (3%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||| ||||| || ||||||||| | |||||||| | Sbjct 54630 GGAAAAGAAACTAACCAGGATTCCCTTAGTAAAGGTGAGTGAACA---AGGAGCCCAGTG 54574 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGT 101 || ||| || | ||| ||||||| |||||| ||| || || Sbjct 54573 CCAAATGCCTGTCCCTTGGTGGGGTGCGGGAAATGAGGTGT 54533 >seq98597 Length=352 Score = 98.7 bits (108), Expect = 5e-19 Identities = 63/69 (91%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||||| ||||||||||||||||| ||||| |||||||| Sbjct 219 GGAAAAGAAACTAACAAGGATTCCCCCAGTAACGGCGAGTGAAGTGGGAATAGCCCAGCA 278 Query 61 CCGAATCCC 69 ||||||||| Sbjct 279 CCGAATCCC 287 >seq35371 Length=2334 Score = 82.4 bits (90), Expect = 4e-14 Identities = 61/70 (87%), Gaps = 1/70 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGA-AGAGCCCAGC 59 |||||||||||||||||||||| ||| |||| ||||||| ||||||| | | |||||||| Sbjct 274 GGAAAAGAAACTAACCAGGATTTCCTTAGTAGCGGCGAGCGAACAGGAATATAGCCCAGC 333 Query 60 GCCGAATCCC 69 | ||||||| Sbjct 334 ACTGAATCCC 343 >seq12684 Length=246053 Score = 78.8 bits (86), Expect = 4e-13 Identities = 76/97 (78%), Gaps = 3/97 (3%) Strand=Plus/Minus Query 3 AAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCC 62 ||| | ||||||||||||| |||| ||||| || |||||||||| | ||||| ||| Sbjct 189684 AAATGGAACTAACCAGGATGCCCTTAGTAAAGGTAAGTGAACAGG---CATCCCAGTGCC 189628 Query 63 GAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGC 99 |||||| ||||| |||||| | |||| ||||||| Sbjct 189627 AAATCCCTGCCCCTTGGTGGGCTGAGGGAAATGTGGC 189591 >seq5638 Length=219 Score = 71.6 bits (78), Expect = 6e-11 Identities = 51/59 (86%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 ||| |||||||| || ||||||||| |||||||||||| |||| ||||| |||||||| Sbjct 205 GGAGAAGAAACTTACGAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAACAGCCCAGC 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230107294080