Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq42595 392 7e-107
seq43180 250 5e-64
seq42138 140 7e-31
seq32227 82.4 2e-13
>seq42595
Length=2895
Score = 392 bits (434), Expect = 7e-107
Identities = 317/382 (83%), Gaps = 21/382 (5%)
Strand=Plus/Plus
Query 1 TACCCGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAA 60
|| || |||||||||| || | || |||||||||| |||| | ||||||||||| ||||
Sbjct 847 TAACCTGCATCTTCACAGGTACTATAATTTCACCGGGTCTCTCGTTGAGACAGTATCCAA 906
Query 61 ATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 907 ATCGTTACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 966
Query 121 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTT-----CGATTGCT 175
|||||||||||||||||||||||||||||||||| | |||| |||| ||| |
Sbjct 967 CCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAAAGCTTCTCCCCGA-AGGG 1025
Query 176 CTAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG 235
|||| ||| ||||||||||||||||||||||| |||||| |||||||||| |||
Sbjct 1026 ATAACCTCTCCTTTTAACCTTCCAGCACCGGGCAGGTGTCAGCCCCTATACATCACCTTA 1085
Query 236 CGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGC-C 294
|| |||||||||||||||||||||||||||||||||||||| || ||| ||||||| |
Sbjct 1086 CGGTTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGATCTTTTCACTGCGGCTC 1145
Query 295 T------------GTCATAGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCC 342
| ||| | | |||||||||||||| |||||||||||| ||||||||
Sbjct 1146 TCCGGACCCGAAGGTCCT--TCGAGCACCCCTTCTCCCGAAGTTACGGGGTGATTTTGCC 1203
Query 343 GAGTTCCTTAACAATAGTTCTC 364
|||||||||||| | |||||||
Sbjct 1204 GAGTTCCTTAACGAGAGTTCTC 1225
>seq43180
Length=4985
Score = 250 bits (276), Expect = 5e-64
Identities = 208/251 (83%), Gaps = 10/251 (4%)
Strand=Plus/Minus
Query 112 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCG-- 169
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 4985 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTCAATGCTTCGGG 4926
Query 170 ATTGCTC--TAACAGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACA 227
||| ||| ||||| ||||||||||||||||||||||||||| ||||| | |||||
Sbjct 4925 ATTACTCCCTAACATCCCCCCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCTTATACT 4866
Query 228 TCGTCTTGCGACTTAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTC 287
|| |||| ||| || ||| | | |||||||||| ||||||||||| ||||||| ||| |
Sbjct 4865 TCATCTTTCGATTTCGCAAAGCCATGTGTTTTTGCTAAACAGTCGCCTGGGCCTTTTCAC 4806
Query 288 TGCGGCCTGT-CATAGAC-----AGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGC 341
|||||| | | | | ||| | || ||||||||||| ||||||| ||| ||||||||
Sbjct 4805 TGCGGCTTCTCCTTTGACGGAGGAAGCGCCCCTTCTCCCGAAGTTACAGGGCCATTTTGC 4746
Query 342 CGAGTTCCTTA 352
| |||||||||
Sbjct 4745 CTAGTTCCTTA 4735
>seq42138
Length=1005
Score = 140 bits (154), Expect = 7e-31
Identities = 97/110 (88%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64
|||||||||||||| | ||||||||||||||| || | ||||||||||||| ||||
Sbjct 896 CGGCATCTTCACCGCTACTACAATTTCACCGAGCTCATGGCCGAGACAGTGCCCAGATCG 955
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 114
|||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 956 TTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1005
>seq32227
Length=2728
Score = 82.4 bits (90), Expect = 2e-13
Identities = 83/108 (77%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 49 GACAGTGCCCAAATCGTTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTC 108
||||||| | ||||| || |||||||| ||||| | ||| ||||| ||| ||||
Sbjct 2075 GACAGTGGGAATCTCGTTGATCCATTCGTGCGCGTCGGTAGTTAGCCGACGAGGCATTTG 2016
Query 109 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTAA 156
||||||||| || || |||||||| ||||||||||| | ||||||
Sbjct 2015 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTAA 1968
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1060960320512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |