Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq43180 432 1e-118 >seq43180 Length=4985 Score = 432 bits (478), Expect = 1e-118 Identities = 402/500 (80%), Gaps = 9/500 (2%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1665 TACGCTCGCAAGAGTGAAACTCAAAGGAATTGACGGGGGTCCGCACAAGCGGTGGAGCAT 1724 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| | |||||| |||||||||| || || || ||||| || Sbjct 1725 GTGGTTTAATTCGATGATACGCGAGGAACCTTACCTGGGCTAGAATGCCCTTGACCGGTC 1784 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| || | |||||||||| | || ||| ||||| ||||||| |||||||| Sbjct 1785 CAGAGATGGACTCT--CCCTTCGGGGCA-AG-GTGCAAGGTGCTGCATGGCCGTCGTCAG 1840 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||| |||||| |||||||||||||||||||||||||||||||| || ||||||||| Sbjct 1841 CTCGTGCCGTGAGGTGTTGGGTTAAGTCCCGCAACGAGCGCAACCCCTATTCTTAGTTGC 1900 Query 241 CATCAT-TAA-GTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCG-GAGGAAGGTGGG 297 || || ||| | |||| |||||||| ||||||| | | ||| | | |||||||| ||| Sbjct 1901 CAGCACATAATGGTGGGGACTCTAAGAAGACTGCCTGCG-CAAGCAGAGAGGAAGGAGGG 1959 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || ||||||| |||||||| |||||| | ||||||||||||||||||||||| | Sbjct 1960 GATGACGTCAGGTCATCATGGCCCTTACGCCCAGGGCTACACACGTGCTACAATGGTGCA 2019 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGA 417 ||||||||| || | | || ||||| |||| || ||||| |||||||||||| Sbjct 2020 TACAAAGGGTTGCAAGCTGGTGACAGCAAGCCAATCTCAAAAAGTGCATCTCAGTTCGGA 2079 Query 418 TTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC-ATG 476 ||| |||||||||||||||| |||||| |||||||||||||||||| |||||| | | Sbjct 2080 TTGGAGTCTGCAACTCGACTCCATGAAGTTGGAATCGCTAGTAATCGCGCATCAGCAACG 2139 Query 477 CTACGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 2140 GCGCGGTGAATACGTTCCCG 2159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1501961899520