Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq36885 282 7e-74
seq96747 188 1e-45
seq38417 152 8e-35
seq31152 149 1e-33
seq44111 143 4e-32
seq38450 141 1e-31
seq103156 140 5e-31
seq26158 131 3e-28
seq18364 96.9 6e-18
>seq36885
Length=681
Score = 282 bits (312), Expect = 7e-74
Identities = 220/261 (84%), Gaps = 5/261 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 164
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||| ||||||| ||| || || ||||||||||||||||| |
Sbjct 165 CCTGTTATTGCCTCAATCTTCCATACGCTAGACGCGCATAGTCCCTCTAAGAAGGTAAGA 224
Query 122 ACCAACCATAGTCGATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | | ||| | |||||||||||| ||||||||||||||| |||||
Sbjct 225 ACGCAGTGCTGGC-ATGCGCGCACCTATTTAGCAGGACGAGGTCTCGTTCGTTAACGGAA 283
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
|||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct 284 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCAAAAAATCA 343
Query 238 AGAAAGAGCTATCAATCTGTC 258
|||||||||| ||| ||||||
Sbjct 344 AGAAAGAGCTTTCAGTCTGTC 364
Score = 268 bits (296), Expect = 1e-69
Identities = 205/241 (85%), Gaps = 5/241 (2%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 ACTCGTTGAATGCATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 501
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||| ||||||| ||| || || ||||||||||||||||| |
Sbjct 502 CCTGTTATTGCCTCAATCTTCCATACGCTAGACGCGCATAGTCCCTCTAAGAAGGTAAGA 561
Query 122 ACCAACCATAGTCGATGGGG----CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAA 177
|| | | | ||| | |||||||||||| ||||||||||||||| |||||
Sbjct 562 ACGCAGTGCTGGC-ATGCGCGCACCTATTTAGCAGGACGAGGTCTCGTTCGTTAACGGAA 620
Query 178 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 621 TTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCA 680
Query 238 A 238
|
Sbjct 681 A 681
>seq96747
Length=339
Score = 188 bits (208), Expect = 1e-45
Identities = 161/193 (83%), Gaps = 8/193 (4%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 151 TCCTTCAGTGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTG 210
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC-CAT 130
||||| | || ||||| | |||| | |||||||||||||| |||| || ||
Sbjct 211 -CTCAATC-TCGTGTGGCTAAACGCCACTTGTCCCTCTAAGAAG--TTGCACCGACGCAG 266
Query 131 AGTCGATGGG---GCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
|| ||| || |||||||||||| || |||||||||||||||||||||||||||||
Sbjct 267 AGCGGATCGGTGAACTATTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGAC 326
Query 188 AAATCACTCCACC 200
||||| |||||||
Sbjct 327 AAATCGCTCCACC 339
>seq38417
Length=698
Score = 152 bits (168), Expect = 8e-35
Identities = 149/189 (79%), Gaps = 5/189 (3%)
Strand=Plus/Minus
Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75
|||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||
Sbjct 187 TCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CTC 129
Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCG 135
| | || |||||| | ||| | |||||||||||||| | | || ||| | |
Sbjct 128 GATC-TCGTGTGGCTGAAGTCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTGGGG 70
Query 136 ATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192
| | | ||| |||||| | ||||||||||||||||||||||||||||||||||
Sbjct 69 GTCGCGTAACTAGTTAGCATGGAGGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 10
Query 193 ACTCCACCA 201
||||||||
Sbjct 9 GCTCCACCA 1
Score = 91.5 bits (100), Expect = 2e-16
Identities = 58/62 (94%), Gaps = 1/62 (2%)
Strand=Plus/Minus
Query 12 TCCGT-CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATT 70
||||| ||||||||||||||||| |||| | |||||||||||||||||||||||||||||
Sbjct 569 TCCGTTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATT 510
Query 71 GC 72
||
Sbjct 509 GC 508
>seq31152
Length=480993
Score = 149 bits (164), Expect = 1e-33
Identities = 167/220 (76%), Gaps = 9/220 (4%)
Strand=Plus/Plus
Query 46 CTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCC 105
||| | |||||||||| ||||||||| |||| || |||| ||| ||| | ||||
Sbjct 152169 CTATGAGCATCACAGATCTGTTATTGT-TCAATCTCGGATTG-CTGAGCACCACTTGTCC 152226
Query 106 CTCTAAGAAGCCAGCCA---CCAAC----CATAGTCGATGGGGCTATTTAGCAGGTTAAG 158
| ||||||||| | || || || | ||| ||| | |||| | | |
Sbjct 152227 CCCTAAGAAGCTGGGGGAGGCCGACTGCTCAGGGATCATGTAACTAGTCAGCATGCCATG 152286
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
||||| ||| ||||| ||||| |||||||||||| ||||||||| |||||| ||||||||
Sbjct 152287 GTCTCATTCCTTATCAGAATTTACCAGACAAATCGCTCCACCAATTAAGAATGGCCATGC 152346
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||| |||||||||| ||||||||||
Sbjct 152347 ACCACCACCCATAGAATCGAGAAAGAGCTGTCAATCTGTC 152386
>seq44111
Length=786367
Score = 143 bits (158), Expect = 4e-32
Identities = 162/212 (76%), Gaps = 9/212 (4%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||| | ||||| |||| | | |||||||||||||||||||||||||||| ||
Sbjct 563105 GTCAGTGTAGCACACGTGCAGCCCTGGATATCTAAGGGCATCACAGACCTGTTATTG-CT 563163
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA---CCAAC-CAT 130
||| | || |||||| | |||| | |||||||||||||| | | | || |
Sbjct 563164 CAATC-TCAGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGGGAATGCTGACTGCT 563222
Query 131 AGTCG---ATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGAC 187
|| | ||| ||| |||||| | | ||||| ||| ||||| ||||||| |||||
Sbjct 563223 TGTGGGTCATGTAACTAGTTAGCATGCCAGAGTCTCATTCATTATCAGAATTAAACAGAC 563282
Query 188 AAATCACTCCACCAACTAAGAACGGCCATGCA 219
|||| |||||||||||||||||| || |||||
Sbjct 563283 AAATTACTCCACCAACTAAGAACTGCTATGCA 563314
>seq38450
Length=350
Score = 141 bits (156), Expect = 1e-31
Identities = 155/201 (77%), Gaps = 19/201 (9%)
Strand=Plus/Plus
Query 13 CCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 72
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 153 CCTTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG- 211
Query 73 CTCAAACTTCCATTGGCTGGAA--GCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC--- 127
||||| | || |||| ||| ||| | ||||||||||||| ||| | |||
Sbjct 212 CTCAATC-TCGTGCGGCTAGAATTGCCGCTTATCCCTCTAAGAAG-AAGCTGCGAACTGG 269
Query 128 -CA-TAGTCGATGG---------GGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGA 176
|| | | | ||| | ||| |||| ||| | ||||||||||||||||||
Sbjct 270 ACACCAATTGCTGGAGATCCGTCGACTAGTTAGTAGGCCAGAGTCTCGTTCGTTATCGGA 329
Query 177 ATTAACCAGACAAATCACTCC 197
|||||||||||||||| ||||
Sbjct 330 ATTAACCAGACAAATCGCTCC 350
>seq103156
Length=387
Score = 140 bits (154), Expect = 5e-31
Identities = 177/244 (73%), Gaps = 42/244 (17%)
Strand=Plus/Plus
Query 12 TCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG 71
||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 148 TCCTTCAGTGTAGCGCGCGTGCGGCCCAGGACATCTAAGGGCATCACAGACCTGTTATTG 207
Query 72 CCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGC--------------- 116
| |||| || | |||| |||| | ||||||||||||||
Sbjct 208 C-TCAATCT-CGTGCGGCTCGAAGACGCCGGTCCCTCTAAGAAGAATTTTAATACGTCGT 265
Query 117 ---------------CA----GCCAC-CA-ACCATAGT--CGATGGGGCTATTTAGCAGG 153
|| ||| | || ||| | | ||| | ||||||||||||
Sbjct 266 CAGTGAGTTGCGCGACACGAGGCCGCGCACACCTAAATAACGACGC--CTATTTAGCAGG 323
Query 154 TTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGC 213
|| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 324 CTAGAGTCTCGTTCGTTACCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGC 383
Query 214 CATG 217
||||
Sbjct 384 CATG 387
>seq26158
Length=3839445
Score = 131 bits (144), Expect = 3e-28
Identities = 100/117 (85%), Gaps = 1/117 (1%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | || |||| ||| |||||| |||||||||||||||| ||||||||
Sbjct 1413704 CTAGTTAGCATTTCAAAGTCTTGTTTGTTATCAAAATTAACCAGACAAATAGCTCCACCA 1413763
Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||| ||||||||| ||||||||| ||||| |||||||||||||||||| ||
Sbjct 1413764 ACTAAGAATGGCCATGCA-CACCACCCACGGAATCGAGAAAGAGCTATCAATCTATC 1413819
>seq18364
Length=1033060
Score = 96.9 bits (106), Expect = 6e-18
Identities = 65/73 (89%), Gaps = 0/73 (0%)
Strand=Plus/Plus
Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201
||| |||||| | | |||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 709029 CTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGAAATTAACCAGACAAATCGCTCCACCA 709088
Query 202 ACTAAGAACGGCC 214
|||||||||||||
Sbjct 709089 ACTAAGAACGGCC 709101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795753982872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |