Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq44287 347 2e-93
seq41393 347 2e-93
seq41314 347 2e-93
seq33930 241 2e-61
seq24612 217 3e-54
seq12684 185 1e-44
seq58056 154 3e-35
seq40917 111 3e-22
seq106768 100 5e-19
seq32075 95.1 2e-17
seq33548 89.7 9e-16
seq42595 87.8 3e-15
seq13120 87.8 3e-15
seq38 84.2 4e-14
seq37373 78.8 2e-12
seq33405 73.4 7e-11
>seq44287
Length=2052047
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 746134 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 746075
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 746074 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 746015
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 746014 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 745955
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 745954 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 745895
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 745894 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 745841
>seq41393
Length=2893867
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 2238713 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 2238654
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2238653 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 2238594
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2238593 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 2238534
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 2238533 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 2238474
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 2238473 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 2238420
>seq41314
Length=101420
Score = 347 bits (384), Expect = 2e-93
Identities = 254/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 4650 TACTGAGCAGGATTACCATGGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 4591
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 4590 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 4531
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4530 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 4471
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 4470 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 4411
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | || | |||||||| ||||| | |||||| ||| |||||||
Sbjct 4410 TAAAACCCAAAAGGTCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 4357
>seq33930
Length=681605
Score = 241 bits (266), Expect = 2e-61
Identities = 232/295 (79%), Gaps = 6/295 (2%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | |||||||| | | || |||||||||||||||||||||||||||||
Sbjct 374753 TACTGAGCAGGATTACCATGGCAACAACCCATCATCAGTAGGGTAAAACTAACCTGTCTC 374812
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| | |||||||||||||||||| ||||||||||||||||||||||| || | ||| |
Sbjct 374813 ACCATGGTCTAAACCCAGCTCACATTCCCTATTAGTGGGTGAACAATACAGCTCTTGTTG 374872
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||| ||||| ||| |||||||||||| | || || |||
Sbjct 374873 AATTCTGCTTCACAATGATAGGTAGAGC---CATGGAAGGATCAAAACACCACATCTCTA 374929
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|| | ||||| |||| ||||||||||||||||| |||||||||||| |||||| ||
Sbjct 374930 GAAAGGTTTGGCCGCCAGAAGCCAGTTATCCCTGTAGTAACTTTTCTGACACCTCCTGCT 374989
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCAT--GGTTTGTATT 292
| ||| | || | |||||| | | ||| ||||||||| ||| ||||||
Sbjct 374990 TAAAACCCAAAAGGTCAGAAGGATTGTGAAGCCCCACTTTCATGGGGTCTGTATT 375044
>seq24612
Length=443934
Score = 217 bits (240), Expect = 3e-54
Identities = 162/189 (86%), Gaps = 3/189 (2%)
Strand=Plus/Minus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
|||||||||||||||||||||||| || |||||||||||| |||| |||||| |||||||
Sbjct 21217 GTAAAACTAACCTGTCTCATGACGTTCCAAACCCAGCTCAGGTTCTCTATTATTGGGTGA 21158
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
|| |||||| |||| |||||||||||| | |||||||||||| |||| || ||||
Sbjct 21157 ACCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGAGCCAACATTGAGGGAT 21101
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
||||||| |||||||||||||| |||||| || |||| ||||||||||||||||| ||
Sbjct 21100 CAAAAAGGGACGTCGCTATGAACTCTTGGCCGCTACAAAGCAGTTATCCCTGTGGTATCT 21041
Query 222 TTTCTGGCA 230
|||||| ||
Sbjct 21040 TTTCTGACA 21032
>seq12684
Length=246053
Score = 185 bits (204), Expect = 1e-44
Identities = 157/193 (81%), Gaps = 3/193 (2%)
Strand=Plus/Plus
Query 42 GTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGA 101
||||||||||||||||||| || | ||||||| |||||| ||||| | ||| |||||||
Sbjct 186054 GTAAAACTAACCTGTCTCACGATGTTCTAAACTAAGCTCAGGTTCCTTGTTACTGGGTGA 186113
Query 102 ACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGAT 161
| |||||| |||| |||||||||||| | ||||||||| || ||| | ||||||
Sbjct 186114 TCCATCCAATGCTTGGTGAATTCTGCTTC---ACAATAGGAAGATCCAACACCAAAGGAT 186170
Query 162 CAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACT 221
|||||||||| || |||||||| |||||| | ||||| ||||||||||||||||| ||
Sbjct 186171 CAAAAAGCAATGTTGCTATGAATTCTTGGCCACTACAAGGCAGTTATCCCTGTGGTATCT 186230
Query 222 TTTCTGGCACCTC 234
| |||| ||| ||
Sbjct 186231 TCTCTGCCACATC 186243
>seq58056
Length=219
Score = 154 bits (170), Expect = 3e-35
Identities = 96/103 (93%), Gaps = 0/103 (0%)
Strand=Plus/Minus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||
Sbjct 219 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGA 160
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
||||||||||||||||||||||| |||||| |||| ||||||
Sbjct 159 AGGACTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTC 117
>seq40917
Length=733
Score = 111 bits (122), Expect = 3e-22
Identities = 84/99 (85%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 196 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGAC 255
|||||||||||||||||||||||||||||||| ||||||| || ||||| | || |
Sbjct 1 ACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTTGCTTCAAACTCTGAAGTTA 60
Query 256 TAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
||||||||||||||||| |||||| |||||||||||
Sbjct 61 AAAAGGATCGATAGGCCATGCTTTCACAGTTTGTATTCA 99
>seq106768
Length=423
Score = 100 bits (110), Expect = 5e-19
Identities = 77/90 (86%), Gaps = 1/90 (1%)
Strand=Plus/Minus
Query 191 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGA 250
||||||||||||||||||||||||||||||||||||||||||||| | || ||| ||
Sbjct 423 CTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTTG-CTAAAAACTCTT 365
Query 251 GGGACTAAAGGATCGATAGGCCACACTTTC 280
||||||||||||||||||| |||||
Sbjct 364 TATACTAAAGGATCGATAGGCCGTGCTTTC 335
>seq32075
Length=145
Score = 95.1 bits (104), Expect = 2e-17
Identities = 66/74 (89%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | |||| |||||||||||||||||||||||||||||||||
Sbjct 73 TACTAGGTTGAATTACTATGGCGGCG-CGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 15
Query 61 TGACGGTCTAAACC 74
|||||||||||||
Sbjct 14 CGACGGTCTAAACC 1
>seq33548
Length=3395607
Score = 89.7 bits (98), Expect = 9e-16
Identities = 60/67 (90%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 138 TAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCAC 197
||||||||||| ||| |||| |||||||||||| || |||||||||||||||| |||||
Sbjct 1923043 TAGGAAGAGCCACCATTGAAGCATCAAAAAGCAAGGTTGCTATGAACGCTTGGCCGCCAC 1922984
Query 198 AAGCCAG 204
|||||||
Sbjct 1922983 AAGCCAG 1922977
>seq42595
Length=2895
Score = 87.8 bits (96), Expect = 3e-15
Identities = 125/175 (71%), Gaps = 6/175 (3%)
Strand=Plus/Plus
Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112
|||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| |||||
Sbjct 286 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 345
Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169
||| ||| | ||| || | | ||| || ||||||||||||| | |||| |
Sbjct 346 CTTGGGACCTACTTCAGCCCCAGGATGC---GATGAGCCGACATCGAGGTGCCAAACCTC 402
Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224
||||| | ||||| ||||| | | ||||| |||||||| |||| |||||
Sbjct 403 CCCGTCGATGTGAACTCTTGGGGGAGATAAGCCTGTTATCCCCAGGGTAGCTTTT 457
>seq13120
Length=1394723
Score = 87.8 bits (96), Expect = 3e-15
Identities = 155/226 (69%), Gaps = 19/226 (8%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||| |||||| ||||| ||| | | |||| | ||||||||||| | ||
Sbjct 251892 TCATCAGTAGGACAAAACTGTCCTGTATCACCATTGCCTAATCACAGCTCACGTT-CTTA 251950
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGA------------- 137
||| |||||||||||||| || |||| ||| ||||||| |||
Sbjct 251951 TTAATGGGTGAACAATCCCACCCTTAGTGAAGGCTGCTTCACAGTGAAGAACCAATATTT 252010
Query 138 -TAGGAAGAGCCGACATCGAAGGATCAAA-AAGCA---ACGTCGCTATGAACGCTTGGCT 192
| |||| || | ||| ||||| |||| || || | | || ||||| ||||||
Sbjct 252011 TAACGAAGTGCTAATATCTAAGGACCAAACAAACAGTGGCATTGCCATGAATACTTGGCC 252070
Query 193 GCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238
||||| || | ||| ||||| ||| |||||| ||||||| ||
Sbjct 252071 ACCACATTGCAATAATCTCTGTGATAAACTTTCTGACACCTCTTGC 252116
>seq38
Length=2139167
Score = 84.2 bits (92), Expect = 4e-14
Identities = 49/51 (96%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCA 81
|||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 1945463 TCATCAGTAGGGTAAAACTAACCTGTCTCAGGATGGTCTAAACCCAGCTCA 1945413
>seq37373
Length=5845335
Score = 78.8 bits (86), Expect = 2e-12
Identities = 51/56 (91%), Gaps = 0/56 (0%)
Strand=Plus/Plus
Query 163 AAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218
|||||||||| || ||||| || |||||||||||||||||||||||| ||||||||
Sbjct 4363359 AAAAAGCAACATCACTATGCACACTTGGCTGCCACAAGCCAGTTATCTCTGTGGTA 4363414
>seq33405
Length=1048
Score = 73.4 bits (80), Expect = 7e-11
Identities = 60/72 (83%), Gaps = 1/72 (1%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| || | |||| | ||||||||||||||||||||||||||||
Sbjct 977 TACTGAGCAGTATTACTATCGCAACGACAAGCCATCAGTAGGGTAAAACTAACCTGTCTC 1036
Query 60 ATGACGGTCTAA 71
| ||||||||||
Sbjct 1037 ACGACGGTCTAA 1048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853242185472
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |