Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq42595 279 1e-72 seq42138 197 3e-48 >seq42595 Length=2895 Score = 279 bits (308), Expect = 1e-72 Identities = 198/227 (87%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 665 GACAGTGTCAGGCGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGC 606 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 |||||| | ||||||| ||| |||||| ||| |||| |||| ||||||| ||||| | | Sbjct 605 CCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCGCAGAGTGTAAAGGCACAAGGGAGCT 546 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||||| ||| |||||| ||||||||||||||||||||||| |||||||| || | Sbjct 545 TGACTGCGAGACCTACAAGTCGAGCAGGGACGAAAGTCGGGCTTAGTGATCCGGTGGCAC 486 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | |||||| |||| |||||| ||||||||||||||||||||||||| Sbjct 485 CGCATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCTGGGGATA 439 >seq42138 Length=1005 Score = 197 bits (218), Expect = 3e-48 Identities = 181/229 (79%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 |||||||||| | ||| ||||||||||||| |||||||||| |||||||||||||||| Sbjct 725 GGGACAGTGTGTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGC 666 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 ||||| ||||||||| | ||| |||| | || || |||| ||| ||||||| Sbjct 665 TTTCAAAGGTACCCTCAGTACGATTGGTAACCGTACGTGGAGCGCAATAGCATAAGGGTG 606 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 ||||||| || ||| |||||| ||||||| |||||| ||| || |||||||| ||| Sbjct 605 CTTGACTGTGAGACCTACAAGTCGAGCAGGGTCGAAAGACGGATATAGTGATCCGGTGGT 546 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | |||||| |||| |||||| | ||||||||| ||| ||||||||| Sbjct 545 TCCGCATGGAAGGGCCATCGCTCAAAGGATAAAAGGTACTCTGGGGATA 497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981068730112