Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
seq42595 279 1e-72
seq42138 197 3e-48
>seq42595
Length=2895
Score = 279 bits (308), Expect = 1e-72
Identities = 198/227 (87%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172
||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 665 GACAGTGTCAGGCGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGTAACGGAGGCGC 606
Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232
|||||| | ||||||| ||| |||||| ||| |||| |||| ||||||| ||||| | |
Sbjct 605 CCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCGCAGAGTGTAAAGGCACAAGGGAGCT 546
Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292
||||||||| ||| |||||| ||||||||||||||||||||||| |||||||| || |
Sbjct 545 TGACTGCGAGACCTACAAGTCGAGCAGGGACGAAAGTCGGGCTTAGTGATCCGGTGGCAC 486
Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| |||||| |||| |||||| |||||||||||||||||||||||||
Sbjct 485 CGCATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCTGGGGATA 439
>seq42138
Length=1005
Score = 197 bits (218), Expect = 3e-48
Identities = 181/229 (79%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170
|||||||||| | ||| ||||||||||||| |||||||||| ||||||||||||||||
Sbjct 725 GGGACAGTGTGTGGTGGGTAGTTTGACTGGGGTGGTCGCCTCCAAAAGAGTAACGGAGGC 666
Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230
||||| ||||||||| | ||| |||| | || || |||| ||| |||||||
Sbjct 665 TTTCAAAGGTACCCTCAGTACGATTGGTAACCGTACGTGGAGCGCAATAGCATAAGGGTG 606
Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290
||||||| || ||| |||||| ||||||| |||||| ||| || |||||||| |||
Sbjct 605 CTTGACTGTGAGACCTACAAGTCGAGCAGGGTCGAAAGACGGATATAGTGATCCGGTGGT 546
Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
| | |||||| |||| |||||| | ||||||||| ||| |||||||||
Sbjct 545 TCCGCATGGAAGGGCCATCGCTCAAAGGATAAAAGGTACTCTGGGGATA 497
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981068730112
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |