Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq42138 165 9e-39 seq42595 156 5e-36 >seq42138 Length=1005 Score = 165 bits (182), Expect = 9e-39 Identities = 117/138 (85%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| |||||| | |||||||| |||||||||||||| |||||||||||||| || Sbjct 868 GGGGTCTTTCCGTCCCGTTGCGGGTAAGCGGCATCTTCACCGCTACTACAATTTCACCGA 927 Query 84 GCTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCG 143 ||||| || ||||||| ||||||||||||||||||||||||||||||| Sbjct 928 GCTCATGGCCGAGACAGTGCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCG 987 Query 144 ACAAGGAATTTCGCTACC 161 |||||||||||||||||| Sbjct 988 ACAAGGAATTTCGCTACC 1005 >seq42595 Length=2895 Score = 156 bits (172), Expect = 5e-36 Identities = 139/180 (77%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 24 GGGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGA 83 ||||||||| ||||| |||||||||| | |||||||||| | ||||| |||||||| | Sbjct 823 GGGGTCTTTCCGTCCTGTCGCGGGTAACCTGCATCTTCACAGGTACTATAATTTCACCGG 882 Query 84 G-CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCC 142 | ||| || ||||||||| |||||| ||||||| ||||||||||||||| Sbjct 883 GTCTCTCG-TTGAGACAGTATCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCC 941 Query 143 GACAAGGAATTTCGCTACCTTAGGACCGTTANNNNNNNNNNNNNNGTTTACTGGGGCTTC 202 ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 942 GACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTC 1001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546481650888