Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq43180 181 2e-43 seq97921 170 4e-40 >seq43180 Length=4985 Score = 181 bits (200), Expect = 2e-43 Identities = 140/165 (85%), Gaps = 1/165 (1%) Strand=Plus/Minus Query 29 CACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTC 88 |||||||||| |||||| |||| | || |||||| ||||||||||| ||||||||||| Sbjct 1188 CACGCGGCAT-GGCTGGTTCAGAGTCTCCTCCATTGACCAATATTCCCTACTGCTGCCTC 1130 Query 89 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCTCTCAGACCAGTT 148 |||||||||||||| |||||||||||| |||||||| ||||||||||||||||| | Sbjct 1129 CCGTAGGAGTCTGGCCCGTGTCTCAGTGCCAGTGTGGGGGATCATCCTCTCAGACCCCCT 1070 Query 149 ACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAACTAGCTAAT 193 | |||||||||||||| ||| ||||| |||||||||||||| Sbjct 1069 AGCCATCGTCGCCTTGGTAGGCCGTTACCCTACCAACTAGCTAAT 1025 >seq97921 Length=347 Score = 170 bits (188), Expect = 4e-40 Identities = 115/129 (89%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 66 CCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGA 125 |||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 347 CCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGG 288 Query 126 CTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCACCAAC 185 ||||| |||||||| || || |||||||||||||||||||| ||||||||||||| Sbjct 287 GGGATCACCCTCTCAGGCCCCCTAAAGATCGTCGCCTTGGTGAGCCGTTACCTCACCAAC 228 Query 186 TAGCTAATC 194 ||||||||| Sbjct 227 TAGCTAATC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1070547311360