Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq42595 331 3e-88
seq43180 315 3e-83
seq111985 78.8 3e-12
>seq42595
Length=2895
Score = 331 bits (366), Expect = 3e-88
Identities = 421/571 (74%), Gaps = 25/571 (4%)
Strand=Plus/Plus
Query 1 TCGACTACGGAGCTTAATCCCCCGCAGTCTCACAGCCGCGCTCTCACTTCCCGGCATTCG 60
||||| ||||| |||| || | ||| |||| || ||| | | | | | ||||||||
Sbjct 1899 TCGACGACGGATCTTA-TCACTCGCCGTCTGACTCCCGGACG-TAAGTGCTTGGCATTCG 1956
Query 61 GAGTTTGGTTGATTTCGGTAAGCTTGTGGG--CCCCCTAGACCATCCAGTGCTCTACCTC 118
||||||| ||| ||||||| | |||||| |||| || | ||| |||||||||||||
Sbjct 1957 GAGTTTGACTGAACTCGGTAATCCTGTGGGGACCCCTTATTCAATC-AGTGCTCTACCTC 2015
Query 119 CGGGAAGAAACACGC----GACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCA 174
| ||| ||| | || ||| |||||| ||||||||||||||||||||||
Sbjct 2016 C---AAGTCTCACTCATCCGAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCAGCTATCT 2072
Query 175 CGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAG 234
| ||| ||||||| ||||||||||| ||||| |||||||| || |||| ||| | |
Sbjct 2073 CCGTGTTCGATTGGCATTTCACCCCTACCCACACCTCATCCCCGCATTTTTTAACATGCG 2132
Query 235 TGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTT 294
||||||||| |||||| | || ||||| | ||||| |||| ||||| ||||||||
Sbjct 2133 TGGGTTCGGGCCTCCATTCAGTGTTACCTGAACTTCACCCTGGACATGGGTAGATCACAC 2192
Query 295 CGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCT 354
| |||||||| | | |||||| |||||||||| |||||||||||||| |||||
Sbjct 2193 GGTTTCGGGTCGACAACCCTAAACTCATTCGCCCTATTCAGACTCGCTTTCGCTGCGGCT 2252
Query 355 ACCCCAC-ACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCTTCAAAAGG 413
| || | | | ||||||| || | || |||||| || |||||| |||||||
Sbjct 2253 CCGCCTCTTCAGCTTAACCTTGC-TTAGAATCGTCACTCGCCGGTCCATTCTACAAAAGG 2311
Query 414 CACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTT 473
|||| |||||| || || || ||||| || ||||| ||||| ||||
Sbjct 2312 TACGCTGTCACC-----CCCGAAGGG------GGCTCCAACTACTTGTAAGCACACGGTT 2360
Query 474 TCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTC 533
||||| || ||||||||||| | ||||| ||||||||||||||||||||||||| ||
Sbjct 2361 TCAGGATCTCTTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGGTACTGGTT 2420
Query 534 CGCTATCGGTCACCAAGGAGTATTTAGGCTT 564
| ||||||||||| ||||||||||| |||
Sbjct 2421 CACTATCGGTCACTGGGGAGTATTTAGCCTT 2451
>seq43180
Length=4985
Score = 315 bits (348), Expect = 3e-83
Identities = 371/497 (75%), Gaps = 20/497 (4%)
Strand=Plus/Minus
Query 109 GCTCTACCTCCGGGAAGAAA-CACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167
|||||||||| | |||| | || | ||||||| |||||| ||||||||||||| || |
Sbjct 3927 GCTCTACCTCTGT-AAGACATCATCCCACGCTGCCCCTAAAGGCATTTCGGGGAGTACGA 3869
Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227
||||| | |||||||||||||||||||||||| ||||| ||||||| | ||||||
Sbjct 3868 GCTATTTCCCAGTTTGATTGGCCTTTCACCCCTACCCACAAGTCATCCAAAAACTTTTCA 3809
Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287
|| | |||||||||||||| ||| |||||| ||||||||||| ||||| |||
Sbjct 3808 ACGTTTACTGGTTCGGTCCTCCAGTTGGTTTTACCCAACCTTCAACCTGCTCATGGGTAG 3749
Query 288 ATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCGC 347
||||| | |||| |||| || ||| ||||||| ||| |||||||||||||
Sbjct 3748 ATCACAAGGTTTCGCGTCTACCTCCACTGACTAGCACGCCCTGTTCAGACTCGCTTTCGC 3689
Query 348 TACGGCTACCCC----ACACGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATT 403
| ||||||| | | ||||||| || | || |||||| |||||||||
Sbjct 3688 TCCGGCTACGTACTTTAAAGCACTTAACCTTGCCAGTGAAGAGTAACTCGTAGGCTCATT 3629
Query 404 CTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAG 463
| |||||||||||||||||| | || || || |||||||| | |||||
Sbjct 3628 ATGCAAAAGGCACGCCGTCACA--GAACTTA---------TCTGCTCCGACCGCTTGTAA 3580
Query 464 GCACATGGTTTCAGGTACTATTTCACTCCCCGC--CAGGGGTACTTTTCACCTTTCCCTC 521
|| ||||||||||| ||||||||| ||| ||||| |||||||||||||||| ||
Sbjct 3579 GCGTATGGTTTCAGGGTCTATTTCACCCCCTTATTCAGGG-TACTTTTCACCTTTCCTTC 3521
Query 522 ACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCA 581
|| ||||| || ||||||||||| | |||||||||||| |||| ||| |||| ||| ||
Sbjct 3520 ACAGTACTAGTTCGCTATCGGTCTCTCAGGAGTATTTAGCCTTACCGGATGGTGCCGGCA 3461
Query 582 GATTCACACGAAATTTC 598
|||||| | | |||||
Sbjct 3460 GATTCAGAGGGGATTTC 3444
>seq111985
Length=492
Score = 78.8 bits (86), Expect = 3e-12
Identities = 77/97 (79%), Gaps = 2/97 (2%)
Strand=Plus/Plus
Query 470 GGTTTCAGGTACTATTTCACTCCC-CGCCAGGGGTACTTTTCACCTTTCCCTCACGGTAC 528
||||||| |||||||| |||| | | || | | ||||||| ||||||||||||||||
Sbjct 223 GGTTTCACGTACTATTGAACTCTCTCTTCAAAGTT-CTTTTCAACTTTCCCTCACGGTAC 281
Query 529 TTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
|||||||||||||| | | ||||||||| ||||
Sbjct 282 TTGTCCGCTATCGGACTCGTGTCAGTATTTAGCCTTA 318
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1815136933888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |