Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq97921 185 2e-44 seq43180 163 6e-38 >seq97921 Length=347 Score = 185 bits (204), Expect = 2e-44 Identities = 211/278 (76%), Gaps = 13/278 (5%) Strand=Plus/Minus Query 33 CAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAATGTGGC 92 |||||| || |||||||||||||||||||||||||| |||||||||||| ||| ||||| Sbjct 346 CAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGG 287 Query 93 CGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATCTCACCAACT 152 | ||| |||||||| || ||| |||||||| ||||||| || ||| |||||||||| Sbjct 286 GGATCACCCTCTCAGGCCCCCTAAAGATCGTCGCCTTGGTGAGCCGTTACCTCACCAACT 227 Query 153 ACCTAATCGGCCGCGAGCCCATCTTT---CAGCGATAAATCTTTGGTCAA---AGAATGA 206 | |||||| |||| |||||||||| || || || ||| |||| | ||| Sbjct 226 AGCTAATCTTGCGCGTGCCCATCTTTATCCACCG-TA---GTTT--TCAATATTAACTGA 173 Query 207 TGCCATCCTCTGACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATTCCACTCTGAA 266 ||||| | | | ||||| ||||||| ||| |||| ||| | ||| || | || Sbjct 172 TGCCAGTCAAT-ATATTATAGGGTATTAATCTTCCTTTCGAAAGGCTATCCCCTTGATAA 114 Query 267 AGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 ||||||||||| |||||||| | ||||||| |||| || Sbjct 113 AGGCAGGTTGCACACGTGTTCCGCACCCGTACGCCGCT 76 >seq43180 Length=4985 Score = 163 bits (180), Expect = 6e-38 Identities = 152/193 (79%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||| || ||| |||||| |||||| ||| ||||||||||||||||| Sbjct 1183 GGCATGGCTGGTTCAGAGTCTCCTCCATTGACCAATATTCCCTACTGCTGCCTCCCGTAG 1124 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | ||| |||||||| || ||| | || Sbjct 1123 GAGTCTGGCCCGTGTCTCAGTGCCAGTGTGGGGGATCATCCTCTCAGACCCCCTAGCCAT 1064 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| |||||| ||| ||| | |||||||| ||||| | ||| ||||||| | | Sbjct 1063 CGTCGCCTTGGTAGGCCGTTACCCTACCAACTAGCTAATGGCACGCATGCCCATCCTCTA 1004 Query 181 GCGATAAATCTTT 193 | |||||||||| Sbjct 1003 CCAATAAATCTTT 991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 997047048192