Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq16615 93.3 5e-17
seq39182 86.0 7e-15
seq35752 80.6 3e-13
seq17706 78.8 1e-12
>seq16615
Length=598
Score = 93.3 bits (102), Expect = 5e-17
Identities = 81/98 (83%), Gaps = 2/98 (2%)
Strand=Plus/Plus
Query 11 AACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGT 70
|||||||||||||| || | ||||||||| |||||||| ||| | |||||| ||||
Sbjct 1 AACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGAAGTATTCAGGCGA 59
Query 71 AAG-CCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
| ||||||||||||||||||||||| |||| |||||
Sbjct 60 CCGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 97
>seq39182
Length=5500
Score = 86.0 bits (94), Expect = 7e-15
Identities = 78/97 (80%), Gaps = 1/97 (1%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTAA 72
|||||| |||||| || | |||||| | |||| |||||||||||||| | |||||
Sbjct 5471 CCAACACAATAGGATCGAAA-TCCTATGATGTTATCCCATGCTAATGTATACAAGCGTAG 5413
Query 73 GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
||||||||||| ||||||||||| |||| |||| ||
Sbjct 5412 GCCTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 5376
Score = 80.6 bits (88), Expect = 3e-13
Identities = 78/98 (80%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 13 CCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGTA 71
|||||| |||||| || | |||||| | |||| |||||||||||||| | | |||||
Sbjct 240 CCAACAGAATAGGACCGAAA-TCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGTA 182
Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
|| |||||||| ||||||||||| |||| |||| ||
Sbjct 181 GGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 144
>seq35752
Length=288
Score = 80.6 bits (88), Expect = 3e-13
Identities = 80/101 (79%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GC 68
|| |||||| |||| | || | |||| | | |||| |||||||||||||||| | ||
Sbjct 45 AAGCCAACACAATAAGACCGGAA-TCCTGTGATGTTATCCCATGCTAATGTATTCAGAGC 103
Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109
||| ||||||||||| ||||||||||| |||| |||| ||
Sbjct 104 GTAGGCCTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAG 144
>seq17706
Length=950375
Score = 78.8 bits (86), Expect = 1e-12
Identities = 79/101 (78%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 375595 AAACCAACAAAATAGAACCGTG-GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCG 375537
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||||| |||| |||||
Sbjct 375536 GCTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 375496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 594418637808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |