Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq43180 206 4e-51 >seq43180 Length=4985 Score = 206 bits (228), Expect = 4e-51 Identities = 215/282 (76%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||| ||||||| |||||||||||||| | ||||| | |||||||| | ||||| Sbjct 1551 CCCATGCTTTCGTGCCTCAGCGTCAGTAGTAGCTTAGCAAGCTGCCTTCGCTATAGGTGT 1492 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || | ||||||| |||||||||||||||| ||||||| |||||| | ||| Sbjct 1491 TCTTTACGATATCTATGCATTTCACCGCTACATCGTAAATTCCGCCTGCCTCAACTACAC 1432 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 |||||| || |||| |||| || | ||||||| | |||||| |||||| Sbjct 1431 TCAAGACAACCAGTATCAATGGCGGTTCGACAGTTGAGCTGTCGGCTTTCACCACTGACT 1372 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| | ||||||| |||||||||||||||| ||||||||| ||| || Sbjct 1371 TAATTATCCGCCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCACCCTCCG 1312 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| ||||||||| |||||||| Sbjct 1311 TATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTC 1270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827711974152