Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value seq42595 116 3e-24 seq42138 116 3e-24 >seq42595 Length=2895 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | ||||||||||||||| | || Sbjct 450 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGTGCCACCGGATCACTAAGCCCGA 509 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| || |||| | Sbjct 510 CTTTCGTCCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTGTGCCTTTACACTCT 569 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 570 GCGAATGATTTCCAACC 586 >seq42138 Length=1005 Score = 116 bits (128), Expect = 3e-24 Identities = 112/141 (79%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||| |||||||||||||||||||| | | ||||||||||||||| || Sbjct 508 TACCTTTTATCCTTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTATATCCGT 567 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | |||| || |||||||| ||| ||| ||||| || Sbjct 568 CTTTCGACCCTGCTCGACTTGTAGGTCTCACAGTCAAGCACCCTTATGCTATTGCGCT-C 626 Query 121 CAC-TACGATTTCCGACCGTA 140 ||| |||| || || | |||| Sbjct 627 CACGTACGGTTACCAATCGTA 647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351552810400