Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq42595 379 3e-103
seq42138 297 3e-78
>seq42595
Length=2895
Score = 379 bits (420), Expect = 3e-103
Identities = 247/270 (91%), Gaps = 1/270 (0%)
Strand=Plus/Plus
Query 7 GGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC-TAT 65
||||||| |||||||||| |||||| |||||||| |||| || ||||| |||||| |||
Sbjct 119 GGGCTTCATGCTTAGATGCTTTCAGCACTTATCCCGTCCACACATAGCTACCCAGCGTAT 178
Query 66 GCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAG 125
|| | |||| | ||||||||| |||||| ||| |||||||||||||||||||||||||||
Sbjct 179 GCTCCTGGCGGAACAACTGGTACACCAGCGGTGTGTCCATCCCGGTCCTCTCGTACTAAG 238
Query 126 GACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACG 185
|||||||| ||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 239 GACAGCTCTTCTCAAATTTCCTACGCCCGCGACGGATAGGGACCGAACTGTCTCACGACG 298
Query 186 TTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACT 245
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 299 TTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACT 358
Query 246 TCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||||||||||||| || ||||||||||||
Sbjct 359 TCAGCCCCAGGATGCGATGAGCCGACATCG 388
>seq42138
Length=1005
Score = 297 bits (328), Expect = 3e-78
Identities = 230/274 (84%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61
|||| | | |||| |||| |||| ||||| |||||| ||||||||| ||||| | |||
Sbjct 64 GAGGCGAGTTTCGCACTTATATGCTTTCAGTGCTTATCTCTTCCAAACGTAGCTACTCAG 123
Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121
| ||||| |||| ||||||||| | |||||||||||||| || ||||||||||||||
Sbjct 124 CGGTGCACCTGGCGGTACAACTGATACACCAGAGGTTTGTTCAATTCGGTCCTCTCGTAC 183
Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181
|| || ||||||||| || |||||| | | ||||| |||||||||||||| |
Sbjct 184 TAGAATCAAGCCCTCTCAAACATCTAACGCCCGCAATAGATAGAGACCGAACTGTCTCAC 243
Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 244 GACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCCTTGGGACC 303
Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
| || ||||||||||||| |||||||||||||||
Sbjct 304 TTCTCCAGCCCCAGGATGTGACGAGCCGACATCG 337
Score = 159 bits (176), Expect = 5e-37
Identities = 96/101 (95%), Gaps = 0/101 (0%)
Strand=Plus/Plus
Query 175 GTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCT 234
||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 346 GTCTCACGACGTTCTGAACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCCT 405
Query 235 TGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
|||||||| || ||||||||||||| |||||||||||||||
Sbjct 406 TGGGACCTTCTCCAGCCCCAGGATGTGACGAGCCGACATCG 446
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 779774987232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |