Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 212 2e-52
seq97921 154 4e-35
>seq43180
Length=4985
Score = 212 bits (234), Expect = 2e-52
Identities = 299/414 (72%), Gaps = 12/414 (3%)
Strand=Plus/Minus
Query 5 TTTACAACCCG-AAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
|||||||| | || |||||| || | ||||||||||||||| |||| | | ||||
Sbjct 1215 TTTACAACGCATAACGCCTTCATCCTGCACGCGGCATGGCTGGTTCAGAGTCTCCTCCAT 1156
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
|| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1155 TGACCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTGTCTCAGTGCCAGTG 1096
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
||| | ||||||||||||||| |||| |||||||||| ||| |||| |||||| ||
Sbjct 1095 TGGGGGATCATCCTCTCAGACCCCCTAGCCATCGTCGCCTTGGTAGGCCGTTACCCTACC 1036
Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTC--TT 241
||||||||||| || | ||||| || | | | | | | |||| |
Sbjct 1035 AACTAGCTAATGGCACGCATGCCCATCCTCTACCAATAAATCTTTAATTGCTCCTCCATG 976
Query 242 TGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAG 301
| ||| | | ||| ||||||| | |||||| || |||||||| | |
Sbjct 975 CGAAGGTGCAATGCCATGGGGTATTAATCCGGGTTTCCCCGGGCTATCCCCCGGTAAAGG 916
Query 302 G-CAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360
| |||| | | | |||| ||||||| |||||||| |||| | | | ||| | |
Sbjct 915 GTAAGTTGCATACGCGTTACGCACCCGTGCGCCACTC-TCAG-TACCCCGAAAGGTAC-- 860
Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
||||||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct 859 ----CTACCGTTCGACTTGCATGTATTAGGCCTGCCGCTAGCGTTCATCCTGAG 810
>seq97921
Length=347
Score = 154 bits (170), Expect = 4e-35
Identities = 111/128 (87%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 68 CAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGC 127
||||||||| |||||||||||||||||||||||||| |||||||||||| |||||||||
Sbjct 346 CAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGG 287
Query 128 TGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACT 187
| ||| |||||||| || ||| ||||||||||| |||| ||| ||||| | ||||||
Sbjct 286 GGATCACCCTCTCAGGCCCCCTAAAGATCGTCGCCTTGGTGAGCCGTTACCTCACCAACT 227
Query 188 AGCTAATC 195
||||||||
Sbjct 226 AGCTAATC 219
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1220743501312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |