Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 266 1e-68
seq97921 197 4e-48
>seq43180
Length=4985
Score = 266 bits (294), Expect = 1e-68
Identities = 283/375 (75%), Gaps = 20/375 (5%)
Strand=Plus/Plus
Query 145 GGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGA 204
|||| ||||| | | |||| ||||||||||||||| ||||||||| |||||||||||
Sbjct 1002 GGTAGAGGATGGGCATGCGTGCCATTAGCTAGTTGGTAGGGTAACGGCCTACCAAGGCGA 1061
Query 205 CGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAAC 264
|||| ||| | |||||||| ||||| ||||| ||| |||||||||||| ||| ||
Sbjct 1062 CGATGGCTAGGGGGTCTGAGAGGATGATCCCCCACACTGGCACTGAGACACGGGCCAGAC 1121
Query 265 TCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACG 324
||||||||||||||||||| |||||||||| |||||| | | |||| |||| | |
Sbjct 1122 TCCTACGGGAGGCAGCAGTAGGGAATATTGGTCAATGGAGGAGACTCTGAACCAGCCATG 1181
Query 325 CCGCGTGAGCGATGAAGGCCTT-CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAA---- 379
||||||| ||||||||| || | || ||||| || | | ||||||| ||
Sbjct 1182 CCGCGTGCAGGATGAAGGCGTTATGCGTTGTAAACTGCTTTTATATAGGAAGAAAAAGGG 1241
Query 380 --------------TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGC 425
|||||||||| | || |||| |||||||||| ||||||||||||
Sbjct 1242 AGTGCGCTCCTATCTGACGGTACTATATGAATAAGCACCGGCTAACTCCGTGCCAGCAGC 1301
Query 426 CGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAG 485
|||||||||||| |||| || |||||| |||||| ||| | ||| ||||||||||||||
Sbjct 1302 CGCGGTAATACGGAGGGTGCAAGCGTTGTCCGGATTTA-TTGGGTTTAAAGGGTGCGTAG 1360
Query 486 GTGGTTTCTTAAGTC 500
| || | |||||||
Sbjct 1361 GCGGATAATTAAGTC 1375
>seq97921
Length=347
Score = 197 bits (218), Expect = 4e-48
Identities = 209/274 (76%), Gaps = 1/274 (0%)
Strand=Plus/Plus
Query 21 AGAGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATAC 80
||||||||| ||||||| | ||| |||| | |||||||| | || ||||| | |
Sbjct 74 AGAGCGGCGTACGGGTGCGGAACACGTGTGCAACCTGCCTTTATCAAGGGGATAGCCTTT 133
Query 81 CGAAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGCTC 140
||||||| | |||||| |||||||| || | |||| || | ||| ||
Sbjct 134 CGAAAGGAAGATTAATACCCTATAATATA-TTGACTGGCATCAGTTAATATTGAAAACTA 192
Query 141 CGGCGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAG 200
||| || | ||| | | |||| ||||||||||||||| ||||||||||| ||||||
Sbjct 193 CGGTGGATAAAGATGGGCACGCGCAAGATTAGCTAGTTGGTGAGGTAACGGCTCACCAAG 252
Query 201 GCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCC 260
||||||||| ||| | ||||||||||||||| ||||| ||| |||||||||||| ||
Sbjct 253 GCGACGATCTTTAGGGGGCCTGAGAGGGTGATCCCCCACACTGGTACTGAGACACGGACC 312
Query 261 AAACTCCTACGGGAGGCAGCAGTGGGGAATATTG 294
| |||||||||||||||||||||| |||||||||
Sbjct 313 AGACTCCTACGGGAGGCAGCAGTGAGGAATATTG 346
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1495570572288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |