Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq43180 311 2e-82 >seq43180 Length=4985 Score = 311 bits (344), Expect = 2e-82 Identities = 308/396 (78%), Gaps = 3/396 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| |||| Sbjct 1274 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCCG 1333 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || ||| |||| ||||||||||||||| || | ||||||||| |||||||| | | | Sbjct 1334 GATTTATTGGGTTTAAAGGGTGCGTAGGCGGATAATTAAGTCAGTGGTGAAAGCCGACAG 1393 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 |||||| | || || |||| |||| | || ||||| || | |||| | ||||| Sbjct 1394 CTCAACTGTCGAACCGCCATTGATACTGGTTGTCTTGAGTGTAGTTGAGGCAGGCGGAAT 1453 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | |||||||||||||||| ||||||| | ||||||| | |||||||| |||| Sbjct 1454 TTACGATGTAGCGGTGAAATGCATAGATATCGTAAAGAACACCTATAGCGAAGGCAGCTT 1513 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 ||| || |||||| ||||||| ||||||| |||||||| ||||||||||||||||| Sbjct 1514 GCTAAGCTACTACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAGGATTAGATACCC 1573 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||| |||||||||||||| |||| | ||| || | || | || | | | Sbjct 1574 TGGTAGTCCATGCCGTAAACGATGATTACTCGATGTTGGCG-ATATTACTG--TCAGCGT 1630 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| || || |||||| ||||||||||||||| Sbjct 1631 CCAAGCGAAAGCGTTAAGTAATCCACCTGGGGAGTA 1666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201569519616