Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 311 2e-82
>seq43180
Length=4985
Score = 311 bits (344), Expect = 2e-82
Identities = 308/396 (78%), Gaps = 3/396 (1%)
Strand=Plus/Plus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||| |||||||||||||||||||||||| |||| || |||||| ||||
Sbjct 1274 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCCG 1333
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|| ||| |||| ||||||||||||||| || | ||||||||| |||||||| | | |
Sbjct 1334 GATTTATTGGGTTTAAAGGGTGCGTAGGCGGATAATTAAGTCAGTGGTGAAAGCCGACAG 1393
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
|||||| | || || |||| |||| | || ||||| || | |||| | |||||
Sbjct 1394 CTCAACTGTCGAACCGCCATTGATACTGGTTGTCTTGAGTGTAGTTGAGGCAGGCGGAAT 1453
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| |||||||||||||||| ||||||| | ||||||| | |||||||| ||||
Sbjct 1454 TTACGATGTAGCGGTGAAATGCATAGATATCGTAAAGAACACCTATAGCGAAGGCAGCTT 1513
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
||| || |||||| ||||||| ||||||| |||||||| |||||||||||||||||
Sbjct 1514 GCTAAGCTACTACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAGGATTAGATACCC 1573
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372
|||||||||| |||||||||||||| |||| | ||| || | || | || | | |
Sbjct 1574 TGGTAGTCCATGCCGTAAACGATGATTACTCGATGTTGGCG-ATATTACTG--TCAGCGT 1630
Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| ||| || || |||||| |||||||||||||||
Sbjct 1631 CCAAGCGAAAGCGTTAAGTAATCCACCTGGGGAGTA 1666
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1201569519616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |