Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq96747 224 2e-56
seq36885 217 3e-54
seq103156 215 1e-53
seq38450 192 1e-46
seq38417 147 4e-33
seq57302 123 5e-26
seq44111 86.0 1e-14
seq64219 82.4 1e-13
>seq96747
Length=339
Score = 224 bits (248), Expect = 2e-56
Identities = 240/310 (77%), Gaps = 9/310 (3%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGC---CAGGCCCGCTTTG-GCGGGTCGCCGGCTTC 75
|| |||||| || |||||||||||| | | ||||| || | ||| | ||||
Sbjct 306 GAACGAGACTCTAGCCTGCTAAATAGTTCACCGATCCGCTCTGCGTCGGTG--CAACTTC 249
Query 76 TTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGC 134
|||||||||| | ||| | |||| || | ||||| ||||||||||||||||||||
Sbjct 248 TTAGAGGGACAAGTGGCGTTTAGCCACACGA-GATTGAG-CAATAACAGGTCTGTGATGC 191
Query 135 CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTT 194
|||||||||||| ||||||||||||||||||||||| || ||||| | || | ||||
Sbjct 190 CCTTAGATGTTCGGGGCCGCACGCGCGCTACACTGAAGGAATCAACGTGCTCTTATCCTT 131
Query 195 GGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAAT 254
| |||||||| ||||||| | | || ||| ||||||| ||||| | | ||| |||
Sbjct 130 GCCCGGAAGGGTTGGGTAACCCGTTGAACCTCCTTCGTGCTAGGGATTGGGGCTTGTAAT 71
Query 255 TATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGT 314
| || | | | |||||||||| || |||||||||| ||||| ||| ||||||||||||||
Sbjct 70 TCTTCCCCATGAACGAGGAATTCCCAGTAAGCGCGAGTCATAAGCTCGCGTTGATTACGT 11
Query 315 CCCTGCCCTT 324
||||||||||
Sbjct 10 CCCTGCCCTT 1
>seq36885
Length=681
Score = 217 bits (240), Expect = 3e-54
Identities = 179/216 (83%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||| || || ||| ||||||| ||||||||||||||||||||||
Sbjct 218 CTTCTTAGAGGGACTATGCGCGTCTAGCGTATGGAAGATTGAGGCAATAACAGGTCTGTG 159
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTT---CA 187
|||||||||||||||||||||||||||||||||||||||| | ||||||||| |
Sbjct 158 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTTTCACT 99
Query 188 TCA----CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAG 243
| | ||| || ||||||| |||||||||| | ||| | |||||||||||||||
Sbjct 98 TGATAGTCCTGGGTCGGAAGGCTCGGGTAATCTTTTGAAAGTGCATCGTGCTGGGGATAG 39
Query 244 AGCATTGCAATTATTGCTCTTCAACGAGGAATGCCT 279
| |||||||||| ||| |||| |||||||||| |||
Sbjct 38 ATCATTGCAATTTTTGATCTTAAACGAGGAATTCCT 3
Score = 149 bits (164), Expect = 1e-33
Identities = 102/114 (89%), Gaps = 1/114 (1%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||||||| || || ||| ||||||| ||||||||||||||||||||||
Sbjct 555 CTTCTTAGAGGGACTATGCGCGTCTAGCGTATGGAAGATTGAGGCAATAACAGGTCTGTG 496
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGT 184
|||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 495 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGT 442
>seq103156
Length=387
Score = 215 bits (238), Expect = 1e-53
Identities = 203/254 (80%), Gaps = 6/254 (2%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| || || | ||||| || | ||||| ||||||||||||||||
Sbjct 249 CTTCTTAGAGGGACCGGCGTCTTCGAGCCGCACGA-GATTGAG-CAATAACAGGTCTGTG 192
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| ||||||||||||||||||||||||| || || | ||||
Sbjct 191 ATGCCCTTAGATGTCCTGGGCCGCACGCGCGCTACACTGAAGGAATCAGCATGTTCT--- 135
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
|| ||||| ||| | ||| || | | |||||| ||||||||||||| | | |||
Sbjct 134 CCCTGGCCTAGAGGCCCGGGCAACCCGCTGAAACTCCTTCGTGCTGGGGATTGGGGTTTG 75
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||||| | | | |||||||||| ||||||||||||| ||||| ||| ||||||||||
Sbjct 74 CAATTATCCCCCATAAACGAGGAATTCCTAGTAAGCGCGAGTCATAAGCTCGCGTTGATT 15
Query 311 ACGTCCCTGCCCTT 324
||||||||||||||
Sbjct 14 ACGTCCCTGCCCTT 1
>seq38450
Length=350
Score = 192 bits (212), Expect = 1e-46
Identities = 201/260 (77%), Gaps = 8/260 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC---TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTG 128
||||||||||||| | |||| || ||||| || | ||||| ||||||||||||||
Sbjct 255 CTTCTTAGAGGGATAAGCGGCAATTCTAGCCGCACGA-GATTGAG-CAATAACAGGTCTG 198
Query 129 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCAT 188
|||||||||||||||||||||||||||||||||||||||||| | ||||| || |
Sbjct 197 TGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAAGGGATCAACGTGTCCTC 138
Query 189 CACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCAT 248
| ||| ||| ||| |||||| | | ||| || || || | ||||| | | |
Sbjct 137 CCCCT---CCGAGAGGAGCGGGTAACCCGTTGAAATCCTTTCATGATAGGGATTGGGGTT 81
Query 249 TGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGA 308
||||||| | | | | |||||||||| || ||||||||| ||||| ||| |||||||
Sbjct 80 TGCAATTGTCTCCCATGAACGAGGAATTCCCAGTAAGCGCAAGTCATGAGCTTGCGTTGA 21
Query 309 TTACGTCCCTGCCCTTTGTA 328
||||||||||||||||||||
Sbjct 20 TTACGTCCCTGCCCTTTGTA 1
>seq38417
Length=698
Score = 147 bits (162), Expect = 4e-33
Identities = 147/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
||||||||||||||||||||||||||||||| | |||| |||||||||||||||||| |
Sbjct 508 GCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGAACG 567
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
|| || || | |||| |||| |||| |||||| | | || | | |||||
Sbjct 568 GATCAGCGTGTGTCTACCCTTCGCCGACAGGTGCGGGTAACCCGCTGAACCCCGTTCGTG 627
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
| ||||| | | |||||||||||| | | | |||||||||| || |||||| ||| |||
Sbjct 628 ATAGGGATCGGGGATTGCAATTATTTCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTC 687
Query 294 ATCAGCACGCG 304
|| ||| ||||
Sbjct 688 ATAAGCTCGCG 698
Score = 93.3 bits (102), Expect = 8e-17
Identities = 83/100 (83%), Gaps = 3/100 (3%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGG-CTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | || || |||| || | | ||| ||||||||||||||||
Sbjct 90 CTTCTTAGAGGGACAAGTGGACTTCAGCCACACGA-GATCGAG-CAATAACAGGTCTGTG 147
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGA 170
|||||||||||||| | |||| ||||||||||||||||||
Sbjct 148 ATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGA 187
>seq57302
Length=218
Score = 123 bits (136), Expect = 5e-26
Identities = 77/83 (93%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 246 CATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGT 305
|||||||||| ||| ||||||||||||||| ||||||||||||| ||||||||| |||||
Sbjct 3 CATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGT 62
Query 306 TGATTACGTCCCTGCCCTTTGTA 328
||| |||||||||||||||||||
Sbjct 63 TGACTACGTCCCTGCCCTTTGTA 85
>seq44111
Length=786367
Score = 86.0 bits (94), Expect = 1e-14
Identities = 82/101 (81%), Gaps = 3/101 (3%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 563203 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCTGA-GATTGAG-CAATAACAGGTCTGTG 563146
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGAC 171
|||||||||||| | | |||| ||||| | |||||||||||
Sbjct 563145 ATGCCCTTAGATATCCAGGGCTGCACGTGTGCTACACTGAC 563105
>seq64219
Length=230
Score = 82.4 bits (90), Expect = 1e-13
Identities = 56/63 (89%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325
|||||||||| || |||||| ||| ||||| ||| ||||||||||| |||||||||||||
Sbjct 7 AACGAGGAATTCCCAGTAAGTGCGGGTCATAAGCTCGCGTTGATTAAGTCCCTGCCCTTT 66
Query 326 GTA 328
|||
Sbjct 67 GTA 69
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945916430336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |