Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 352 1e-94
seq42595 239 2e-60
>seq43180
Length=4985
Score = 352 bits (390), Expect = 1e-94
Identities = 403/532 (76%), Gaps = 12/532 (2%)
Strand=Plus/Plus
Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| |||||||||| |||| ||| |||||| ||||||| ||||||||||||
Sbjct 3696 CGAGTCTGAACAGGGCGTGCTAGTCAGTGGAGGTAGACGCGAAACCTTGTGATCTACCCA 3755
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|| |||| ||||||| ||||| || ||||||| ||||||| || ||||||||
Sbjct 3756 TGAGCAGGTTGAAGGTTGGGTAAAACCAACTGGAGGACCGAACCAGTAAACGTTGAAAAG 3815
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
|| |||||| |||||||||||||||||||| || |||||| |||||||||| || ||
Sbjct 3816 TTTTTGGATGACTTGTGGGTAGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGTACT 3875
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTCAAGT-ATCACCATCGGGGGTAGAGC-ACTGTTA 237
| |||||| |||||| || | | || | | | |||||||| || ||
Sbjct 3876 CCCCGAAATGCCTTTAGGGGCAGCGTGGGATGATGTCTTACAGAGGTAGAGCTACCAATA 3935
Query 238 TGGCTAGGGGG--TCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTT 295
| |||||||| ||| | | ||||||| | | |||||||||||| || || |
Sbjct 3936 GGACTAGGGGGAGTCA---CATCCTACCAAATCCTGATGAACTCCGAATGCTGATAAGAT 3992
Query 296 TTACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGA 355
| | | | | |||||||| | |||||||||||||| | |||||||| ||||| || ||
Sbjct 3993 TAATC-CTGCAGTGAGGGTAAGGGTGCTAAGGTCCTTATCCGAGAGGGAAAGAACCCAGA 4051
Query 356 CTATCAGCTAAGGCCCCGAAAT-GACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAG 414
| | ||||||||| ||| |||| ||| ||||||| |||||| | ||| |||| ||
Sbjct 4052 CCAACAGCTAAGGTCCCAAAATCTACA-CTAAGTTGAACTAAGGTGGTCCAGTTGCCGAG 4110
Query 415 ACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTA 474
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4111 ACAGCCAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTG 4170
Query 475 GTCGAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGC 526
|||||| |||| | ||||||||||||| || |||| |||||||||
Sbjct 4171 GTCGAGCGACAGGGCATCGATAATAATCGGGCATCAAGTGTAGTACCGAAGC 4222
>seq42595
Length=2895
Score = 239 bits (264), Expect = 2e-60
Identities = 353/487 (72%), Gaps = 16/487 (3%)
Strand=Plus/Minus
Query 2 CGAGTCCGAACAGGGCGAC--AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCA 59
|||||| ||| ||||||| ||| || ||| ||||||||||| ||||||||||||
Sbjct 2238 CGAGTCTGAATAGGGCGAATGAGTTTAGGGTTGTCGACCCGAAACCGTGTGATCTACCCA 2179
Query 60 TGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAA 119
|| ||||| ||||| | |||||||| |||||| |||||||||| ||||| |||||
Sbjct 2178 TGTCCAGGGTGAAGTTCAGGTAACACTGAATGGAGGCCCGAACCCACGCATGTTAAAAAA 2119
Query 120 TTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCT 179
| ||||||||| ||||||||||||||||| || || | ||| ||| ||||||||||||
Sbjct 2118 TGCGGGGATGAGGTGTGGGTAGGGGTGAAATGCCAATCGAACACGGAGATAGCTGGTTCT 2059
Query 180 CTCCGAAAACTATTTAGGTAGTGCCTC--AAGTATCACCATCGGGGGTAGAGCACTGTTA 237
| |||||| |||||| ||||| | | | | | || |||||||||||| |
Sbjct 2058 CCCCGAAATAGCTTTAGGGCTAGCCTCGGATGAGTGAGACTTGGAGGTAGAGCACTGAT- 2000
Query 238 TGGCTAGGGGGTCATTGC-GACTTACC-AAACCATTGCAAACTCCGAATGCGCATCAGTT 295
|| || |||||| | | ||||| | || | |||||||||||||| | || ||
Sbjct 1999 TGAATAAGGGGTCCCCACAGGATTACCGAGTTCAGT-CAAACTCCGAATGCCAAGCACTT 1941
Query 296 TTACCGCGGGAGT--GAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCG 353
| ||||||| || ||| | ||| |||| ||||| ||| ||| || | ||
Sbjct 1940 ACGTC-CGGGAGTCAGACGGC--GAGTGATAAGATCCGTCGTCGAAAGGGAAACAGCCCA 1884
Query 354 GACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAA 413
||| | |||||| ||| || | ||||||| | || || || |||| |
Sbjct 1883 GACCGCCGACTAAGGTCCCTAAGTTTGTGCTAAGTGGGA--AAGGATGTGACGTTGCCCA 1826
Query 414 GACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACT 473
|||| | |||||||||||| |||||||||| |||||||||||||||||| ||||||||
Sbjct 1825 GACAACCAGGATGTTGGCTCAGAAGCAGCCA-CCATTTAAAGAGTGCGTAATAGCTCACT 1767
Query 474 AGTCGAG 480
||||||
Sbjct 1766 GGTCGAG 1760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1687310389248
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |