Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq42595 136 7e-30 seq43180 132 9e-29 >seq42595 Length=2895 Score = 136 bits (150), Expect = 7e-30 Identities = 186/251 (74%), Gaps = 14/251 (6%) Strand=Plus/Minus Query 10 GGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTA--GTA-GCTTGCGATAAGCTGC 66 ||||||||||||||| | || |||||||||||| | | | || ||||| ||| | Sbjct 2894 GGTGGATGCCTTGGCACTGGGAGCCGATGAAGGACGGAACGAACGC---CGATACGCTTC 2838 Query 67 GGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGC--CCTT 124 |||||| | || | |||||||||| |||||||||||||||| |||||| | ||| Sbjct 2837 GGGGAGCT-GTAAGTAAGCTTTGATCCGAAGATTTCCGAATGGGGGAACCCGCCATCCTG 2779 Query 125 T--GGGT--CATTGCATGCTGAATACATAGGTAT-GCAAAGCGAACGCGGCGAACTGAAA 179 || | ||| |||||||| |||||||| | || || || ||| ||||||||| Sbjct 2778 AACGGATGGCATGCTCTGCTGAATCCATAGGTAGAGTAAGGCAGACCCGGGGAACTGAAA 2719 Query 180 CATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAA 239 ||||| |||| | | ||||| ||||| ||| | |||| || ||||||||||||||||| Sbjct 2718 CATCTCAGTACCCGGAGGAAGAGAAAGCAAATGCGATTTCCTGAGTAGTGGCGAGCGAAA 2659 Query 240 TGGGATGAGCC 250 || | |||| Sbjct 2658 GGGAAACAGCC 2648 >seq43180 Length=4985 Score = 132 bits (146), Expect = 9e-29 Identities = 173/236 (73%), Gaps = 14/236 (6%) Strand=Plus/Plus Query 8 ATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCG 67 |||| |||||||||||| | | |||||| ||||||||| || |||||||||||||| Sbjct 3048 ATGGGGGATGCCTTGGCTCTCAGAGGCGAAGAAGGACGTGATAAGCTGCGATAAGCTGCG 3107 Query 68 GGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTTTGG 127 |||| || ||| | || || ||||||||||||||||||||| |||| | ||| | Sbjct 3108 GGGATTG-GCACATACGAATTAATCCGCAGATTTCCGAATGGGACAACC---CACTTAG- 3162 Query 128 GTCATTGCATGCTGAATA---CATAGGTATGCA--AAGCGAACGCGGCGAACTGAAACAT 182 ||| | || | || ||| || || | || ||| || |||||||||||| Sbjct 3163 ----TTGAAGACTAAGTATCCTGTAGCAATACAGGAGGCAAACCCGCTGAACTGAAACAT 3218 Query 183 CTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAA 238 ||||||| | ||||| ||||| ||| | |||| | ||||||||||||||||| Sbjct 3219 CTAAGTAAGCGGAGGAAGAGAAAACAATAGTGATTGCGTAAGTAGTGGCGAGCGAA 3274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917155457792