Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq43180 295 1e-77 seq97921 143 6e-32 >seq43180 Length=4985 Score = 295 bits (326), Expect = 1e-77 Identities = 258/322 (80%), Gaps = 13/322 (4%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTAC------ATACAAGCTCCC 54 ||||||||||||||||||||||| |||||||||||| |||| ||| ||| | | Sbjct 1302 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCATATAGTACCGTCAGATAGGAGCGCAC 1243 Query 55 ACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | | | ||| |||| |||||||| ||||||||| | || |||||||||| Sbjct 1242 TCCCTT-------TTTCTTCCTATATAAAAGCAGTTTACAACGCATAACGCCTTCATCCT 1190 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | ||||||||||||| |||| |||||||||||||||||| ||||||||||| Sbjct 1189 GCACGCGGCATGGCTGGTTCAGAGTCTCCTCCATTGACCAATATTCCCTACTGCTGCCTC 1130 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| ||| |||||||||||| ||| ||||||||| | |||||||||| ||||| Sbjct 1129 CCGTAGGAGTCTGGCCCGTGTCTCAGTGCCAGTGTGGGGGATCATCCTCTCAGACCCCCT 1070 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCAT 294 | ||||||| | || ||| ||||||||||| || |||| ||||||| |||||| ||||| Sbjct 1069 AGCCATCGTCGCCTTGGTAGGCCGTTACCCTACCAACTAGCTAATGGCACGCATGCCCAT 1010 Query 295 CGTACACCGATGAATCTTTAAT 316 | | ||| || |||||||||| Sbjct 1009 CCTCTACCAATAAATCTTTAAT 988 >seq97921 Length=347 Score = 143 bits (158), Expect = 6e-32 Identities = 118/144 (82%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 152 CCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211 ||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||| Sbjct 347 CCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGG 288 Query 212 GGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTAC 271 |||| | |||||||| |||||| ||||| | || |||| ||||||||| | || || Sbjct 287 GGGATCACCCTCTCAGGCCCCCTAAAGATCGTCGCCTTGGTGAGCCGTTACCTCACCAAC 228 Query 272 TACCTAATGGAACGCATCCCCATC 295 || ||||| ||| | |||||| Sbjct 227 TAGCTAATCTTGCGCGTGCCCATC 204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1067351647744