Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002223.1
Length=366
Score E
Sequences producing significant alignments: (Bits) Value
seq43180 295 1e-77
seq97921 143 6e-32
>seq43180
Length=4985
Score = 295 bits (326), Expect = 1e-77
Identities = 258/322 (80%), Gaps = 13/322 (4%)
Strand=Plus/Minus
Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTAC------ATACAAGCTCCC 54
||||||||||||||||||||||| |||||||||||| |||| ||| ||| | |
Sbjct 1302 GGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCATATAGTACCGTCAGATAGGAGCGCAC 1243
Query 55 ACACGTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114
| | | ||| |||| |||||||| ||||||||| | || ||||||||||
Sbjct 1242 TCCCTT-------TTTCTTCCTATATAAAAGCAGTTTACAACGCATAACGCCTTCATCCT 1190
Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174
||||| | ||||||||||||| |||| |||||||||||||||||| |||||||||||
Sbjct 1189 GCACGCGGCATGGCTGGTTCAGAGTCTCCTCCATTGACCAATATTCCCTACTGCTGCCTC 1130
Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234
|||||||||| ||| |||||||||||| ||| ||||||||| | |||||||||| |||||
Sbjct 1129 CCGTAGGAGTCTGGCCCGTGTCTCAGTGCCAGTGTGGGGGATCATCCTCTCAGACCCCCT 1070
Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATGGAACGCATCCCCAT 294
| ||||||| | || ||| ||||||||||| || |||| ||||||| |||||| |||||
Sbjct 1069 AGCCATCGTCGCCTTGGTAGGCCGTTACCCTACCAACTAGCTAATGGCACGCATGCCCAT 1010
Query 295 CGTACACCGATGAATCTTTAAT 316
| | ||| || ||||||||||
Sbjct 1009 CCTCTACCAATAAATCTTTAAT 988
>seq97921
Length=347
Score = 143 bits (158), Expect = 6e-32
Identities = 118/144 (82%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 152 CCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGG 211
||||||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||
Sbjct 347 CCAATATTCCTCACTGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGG 288
Query 212 GGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTAC 271
|||| | |||||||| |||||| ||||| | || |||| ||||||||| | || ||
Sbjct 287 GGGATCACCCTCTCAGGCCCCCTAAAGATCGTCGCCTTGGTGAGCCGTTACCTCACCAAC 228
Query 272 TACCTAATGGAACGCATCCCCATC 295
|| ||||| ||| | ||||||
Sbjct 227 TAGCTAATCTTGCGCGTGCCCATC 204
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1067351647744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |