Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq39182 618 1e-174
seq41455 378 2e-102
seq43722 282 1e-73
seq106333 248 3e-63
seq7502 154 4e-35
seq125886 136 1e-29
seq17706 134 4e-29
seq32652 113 1e-22
seq4985 113 1e-22
seq3471 77.0 1e-11
>seq39182
Length=5500
Score = 618 bits (684), Expect = 1e-174
Identities = 450/513 (88%), Gaps = 13/513 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| ||| |||||| |||| ||||||||||||||||||
Sbjct 5152 GTACTCATTCCAATTACCAGACTCAAT-GAGCCCGGTATTGTTATTTATTGTCACTACCT 5094
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5093 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 5034
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
||||||||||||||||||||||||||||||||||| |||| |||||| ||||| |||
Sbjct 5033 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATAGTA 4974
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 4973 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCA 4914
Query 241 C-AAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG----AAG--GG 293
| |||||| |||||| ||| |||||| |||||||| || |||| || ||| |
Sbjct 4913 CAAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCA--GAGCAACGGGCAAAGCCCG 4856
Query 294 CGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATT 352
||| | ||||||||||||||| || ||||||| ||||||||||||| | ||| |||||
Sbjct 4855 CGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATT 4796
Query 353 AGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGA 412
|||||||||||||| |||||||||| ||||| |||||| |||||| |||| ||||||||
Sbjct 4795 AGCTCTAGAATTACTACGGTTATCCGAGTAGT-AGGTACCATCAAACAAACTATAACTGA 4737
Query 413 TTTAATGAGCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCT 471
||||||||||||||||||||||||| || | ||| | | ||||||| ||||||||||||
Sbjct 4736 TTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCT 4677
Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||||||||||||||||
Sbjct 4676 TAATCTTTGAGACAAGCATATGACTACTGGCAG 4644
>seq41455
Length=627
Score = 378 bits (418), Expect = 2e-102
Identities = 403/519 (78%), Gaps = 31/519 (6%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59
||||||||||||||| | || ||| | || | | |||||||| | |||||||||
Sbjct 512 GTACTCATTCCAATTGCGAGGCCCCGTTCGGGGCTCGCAACAGTATTTTTCGTCACTACC 453
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 452 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTAGATGTGGTAGCCGT 393
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATA-CCATGG 178
||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |||| |
Sbjct 392 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTT-ATAGCCATTG 334
Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238
||||| || ||||| |||||||| ||||| |||||| | ||||| || | ||||||
Sbjct 333 TAGGCGTATAACCTACAATCGAAAGCTGATAAGGCAGACACTTGAAAGAGGCGGCGCCGG 274
Query 239 CTC-AAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCA-----AGGAGCC---CC 287
| || || |||| | | | |||||||| || ||| || || | | ||
Sbjct 273 TGCGGAGACCGTGCGCTCAGCTCAAAGTTATTCAGATTCAACACAATGGGGTGACGGACC 214
Query 288 GAAGGGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCG----AAGTCGGGGTT 339
|| | || | |||| | |||||||| | | ||||| || || || |||
Sbjct 213 GAGGCCCGACCGGTTTTGAACTAATAAAAGCGCTCTTCCCTTGCGGTCAGAGACGTGGT- 155
Query 340 TTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGT-AGT-AAGGTAC-TATCA 396
|||||||||||||||||||||||||| |||||||| || ||| ||||| |||
Sbjct 154 ----GCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGTGTGGGTACAGATCC 99
Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456
||| || ||| ||||||||||||||||||||| ||||| | || | |||| ||||
Sbjct 98 AATGAATCATAGCTGATTTAATGAGCCATTCGCGGTTTCGCCTTA-ACTCGGCTTGTACT 40
Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 495
|||||||||||||||||||||||||||||||||||||||
Sbjct 39 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGAC 1
>seq43722
Length=6889846
Score = 282 bits (312), Expect = 1e-73
Identities = 205/236 (87%), Gaps = 1/236 (0%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||
Sbjct 5485997 ACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACCTC 5485938
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 121
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5485937 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTT 5485878
Query 122 CTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAG 181
||||||||||||||||||||||||||||| ||||||||| |||||| | ||||||||||
Sbjct 5485877 CTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCATGGTAG 5485818
Query 182 GCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCG 237
|| |||||||||||||||||||||||||| || ||||| | ||||||
Sbjct 5485817 GCACGGCGACTACCATCGAAAGTTGATAGGGCAGACGTTCGAATGGGTCGTCGCCG 5485762
>seq106333
Length=418
Score = 248 bits (274), Expect = 3e-63
Identities = 300/405 (74%), Gaps = 25/405 (6%)
Strand=Plus/Minus
Query 124 CAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGC 183
||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |
Sbjct 418 CAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGACAACCATGGTAGTC 359
Query 184 CACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAA 243
| ||||||||||||||||||| |||||| ||||||| || | ||||||| |
Sbjct 358 GCAGAAACTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGTACTT 299
Query 244 GGCCATGCGATTCGTTAA-GTTATTATGAATCACCAAG------GA-----GCCCCGAAG 291
| ||||||||| | || ||||| || ||| ||| || | | ||| |
Sbjct 298 GACCATGCGATCTGCAAAAGTTATCCAGATTCATCAAAATTAACGACTTCGGACGCGAGG 239
Query 292 ------GGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGGGGTTTT 341
| || | | |||| |||||||||| ||| ||| || ||| | ||| |
Sbjct 238 CCCTCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGAGTTCT 179
Query 342 TA--GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAAT 399
| |||||||||||||||||||||||||| |||||||| ||| ||| ||| ||
Sbjct 178 GATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAG 119
Query 400 AAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAG 459
||| | ||||||| || |||||||||||| || || | || | | |||| ||| ||
Sbjct 118 GAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCACTGAG 60
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 59 ACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 15
>seq7502
Length=874016
Score = 154 bits (170), Expect = 4e-35
Identities = 103/115 (90%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 102 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 411527 CTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTC 411468
Query 162 ACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216
|||||| | |||||||||||| ||||||||||||||||||||||||||
Sbjct 411467 ACCCGTGGTCACCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGA 411413
>seq125886
Length=915
Score = 136 bits (150), Expect = 1e-29
Identities = 97/110 (88%), Gaps = 1/110 (1%)
Strand=Plus/Minus
Query 395 CAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATA 454
|||| ||| ||||||||||||||||||||||||||||||||||||| | | ||
Sbjct 915 CAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCGGCCGTGCGTA 856
Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 855 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 807
>seq17706
Length=950375
Score = 134 bits (148), Expect = 4e-29
Identities = 94/106 (89%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 3 ACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTC 61
|||||||||||||||| | || |||||||| | ||||| ||||| | |||||||||||
Sbjct 375267 ACTCATTCCAATTACAGGGCCTCAAAAGAGTCTTGTATTGTTATTTTTCGTCACTACCTC 375208
Query 62 CCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 107
|||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 375207 CCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGA 375162
>seq32652
Length=300595
Score = 113 bits (124), Expect = 1e-22
Identities = 70/75 (93%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 79 TAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCG 138
|||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 72345 TAATTTGCACACCTGCTGCCTTCCTTAGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCA 72286
Query 139 GAATCGAACCCTAAT 153
|||||||||||| ||
Sbjct 72285 GAATCGAACCCTGAT 72271
>seq4985
Length=2040100
Score = 113 bits (124), Expect = 1e-22
Identities = 97/120 (81%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 97 CCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCC 156
|| |||||||||||||||||| |||||||||||| | |||||||||| ||| || |||||
Sbjct 93034 CCCTCCTTGGATGTGGTAGCCATTTCTCAGGCTCTCACTCCGGAATCAAACTCTGATTCC 92975
Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216
| || |||| | | |||||||||||| ||| |||| |||||||||| ||||||
Sbjct 92974 CTGTCACCCATGGTCACCATGGTAGGCATGGTGACTATCATCAAAAGTTGATATGGCAGA 92915
>seq3471
Length=2246630
Score = 77.0 bits (84), Expect = 1e-11
Identities = 113/153 (74%), Gaps = 9/153 (6%)
Strand=Plus/Minus
Query 343 AGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGT-ACT-ATCAA 397
||||||||| || ||||||| |||||| | |||| | | | || || | | | |||
Sbjct 1314202 AGCATGTATCAGGTCTAGAACTACCACAGACATCCCAGAAAGAGAAAAGTGAGTGACCAA 1314143
Query 398 ATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTAT-AGAT-TGCTTATAC 455
| | | ||| ||||||||||||||||| | ||||||| ||| || || || ||
Sbjct 1314142 AGGATCCATACATGATTTAATGAGCCATTTACCGTTTCACCGTACCAGCCATG--TACAC 1314085
Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGC 488
||| | |||||||||||||||||| |||||||
Sbjct 1314084 TTACATATGCATGGCTTAATCTTTCTGACAAGC 1314052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1508353226752
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