Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq21 174 3e-41
seq126 73.4 7e-11
>seq21
Length=27742158
Score = 174 bits (192), Expect = 3e-41
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 120 ACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAA 179
||||||||||||||||||||||||| | |||| ||||||||||||||||||| | ||
Sbjct 18206314 ACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAG 18206255
Query 180 CGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGG 239
|| || | | ||| ||||| ||| |||||| | | || | | ||||| |||||
Sbjct 18206254 CGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCGTGATGGGG 18206195
Query 240 ATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGC 299
|| | | |||||||||||| | | | |||||||||| || |||||| ||| ||| | |||
Sbjct 18206194 ATCGGGGATTGCAATTATTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGGTCCTAAGC 18206135
Query 300 ACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||||||| ||||||||||||||||
Sbjct 18206134 TTGCGTTGATTAAGTCCCTGCCCTTTGTA 18206106
>seq126
Length=6219632
Score = 73.4 bits (80), Expect = 7e-11
Identities = 125/179 (70%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
||||||||||||| | ||| |||| | ||||||||||| | || | || | | |
Sbjct 2447776 TGCCCTTAGATGTCCAGGGTTGCACATGGGCTACACTGACTGGCTCAGTGTGTGCCTACC 2447835
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCT-GTCGTGCTGGGGATAGAGCATTG 250
| ||||| ||| |||| | | |||||| || ||||| ||||||| | | | ||
Sbjct 2447836 CCACGCCGGCAGGCGCGGGTTA-CCCCTTAAACCCTATTCGTGATGGGGATCGGGGACTG 2447894
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGAT 309
| |||||| | | | ||||| |||| || ||| | ||| ||||| ||| ||| ||||
Sbjct 2447895 CGATTATTCCCCATGAACGAAGAATTCCCAGTGAATGCGGGTCATAAGCTTGCGCTGAT 2447953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947174558208
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |